[gdal-dev] GDAL / Java bindings : undefined symbol: _ZTVN10cxxabiv120si_class_type_infoE in libgdal.so.1

Sun Sep 23 16:39:47 PDT 2012

Tried including the /home/579/hxs579/apps/gdal-trunk/lib into my LD_LIBRARY_PATH but still encountering the same issue.

$ export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/home/579/hxs579/apps/gdal-trunk/lib:/home/579/hxs579/local/gdal-trunk/gdal/swig/java
$ java -classpath '/home/579/hxs579/local/gdal-trunk/gdal/swig/java/gdal.jar':/home/579/hxs579/local/gdal-trunk/gdal/swig/java/apps gdalinfo
Native library load failed.
java.lang.UnsatisfiedLinkError: /home/579/hxs579/apps/gdal-trunk/lib/libgdaljni.so: /home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1: undefined symbol: _ZTVN10__cxxabiv120__si_class_type_infoE
Exception in thread "main" java.lang.UnsatisfiedLinkError: org.gdal.gdal.gdalJNI.AllRegister()V
	at org.gdal.gdal.gdalJNI.AllRegister(Native Method)
	at org.gdal.gdal.gdal.AllRegister(gdal.java:479)
	at gdalinfo.main(gdalinfo.java:87)

When printing shared library dependencies, I managed to reproduce the same issue.
Don't have the same issue on the GDAL Java bindings on Ubuntu machine.  

$ ldd -d -r /home/579/hxs579/apps/gdal-trunk/lib/libgdaljni.so 
	linux-vdso.so.1 =>  (0x00007fff527ff000)
	libgdal.so.1 => /home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1 (0x00007f05d1654000)
	libnetcdf.so.6 => /usr/lib64/libnetcdf.so.6 (0x00007f05d1303000)
	libhdf5.so.6 => /usr/lib64/libhdf5.so.6 (0x00007f05d0d1b000)
	libpq.so.5 => /usr/lib64/libpq.so.5 (0x00007f05d0af3000)
	libpthread.so.0 => /lib64/libpthread.so.0 (0x00007f05d08d6000)
	libm.so.6 => /lib64/libm.so.6 (0x00007f05d0652000)
	librt.so.1 => /lib64/librt.so.1 (0x00007f05d044a000)
	libdl.so.2 => /lib64/libdl.so.2 (0x00007f05d0245000)
	libcurl.so.4 => /usr/lib64/libcurl.so.4 (0x00007f05cfff2000)
	libc.so.6 => /lib64/libc.so.6 (0x00007f05cfc62000)
	libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00007f05cfa4b000)
	libhdf5_hl.so.6 => /usr/lib64/libhdf5_hl.so.6 (0x00007f05cf819000)
	libz.so.1 => /lib64/libz.so.1 (0x00007f05cf603000)
	libssl.so.10 => /usr/lib64/libssl.so.10 (0x00007f05cf3a7000)
	libcrypto.so.10 => /usr/lib64/libcrypto.so.10 (0x00007f05cf00d000)
	libgssapi_krb5.so.2 => /lib64/libgssapi_krb5.so.2 (0x00007f05cedcb000)
	libcrypt.so.1 => /lib64/libcrypt.so.1 (0x00007f05ceb93000)
	libldap_r-2.4.so.2 => /lib64/libldap_r-2.4.so.2 (0x00007f05ce940000)
	/lib64/ld-linux-x86-64.so.2 (0x0000003ee4200000)
	libidn.so.11 => /lib64/libidn.so.11 (0x00007f05ce70e000)
	libldap-2.4.so.2 => /lib64/libldap-2.4.so.2 (0x00007f05ce4c2000)
	libkrb5.so.3 => /lib64/libkrb5.so.3 (0x00007f05ce1e3000)
	libk5crypto.so.3 => /lib64/libk5crypto.so.3 (0x00007f05cdfb7000)
	libcom_err.so.2 => /lib64/libcom_err.so.2 (0x00007f05cddb2000)
	libssl3.so => /usr/lib64/libssl3.so (0x00007f05cdb77000)
	libsmime3.so => /usr/lib64/libsmime3.so (0x00007f05cd94b000)
	libnss3.so => /usr/lib64/libnss3.so (0x00007f05cd60f000)
	libnssutil3.so => /usr/lib64/libnssutil3.so (0x00007f05cd3e9000)
	libplds4.so => /lib64/libplds4.so (0x00007f05cd1e5000)
	libplc4.so => /lib64/libplc4.so (0x00007f05ccfdf000)
	libnspr4.so => /lib64/libnspr4.so (0x00007f05ccda2000)
	libssh2.so.1 => /usr/lib64/libssh2.so.1 (0x00007f05ccb7b000)
	libkrb5support.so.0 => /lib64/libkrb5support.so.0 (0x00007f05cc96f000)
	libkeyutils.so.1 => /lib64/libkeyutils.so.1 (0x00007f05cc76c000)
	libresolv.so.2 => /lib64/libresolv.so.2 (0x00007f05cc552000)
	libfreebl3.so => /lib64/libfreebl3.so (0x00007f05cc2ef000)
	liblber-2.4.so.2 => /lib64/liblber-2.4.so.2 (0x00007f05cc0e0000)
	libsasl2.so.2 => /usr/lib64/libsasl2.so.2 (0x00007f05cbec6000)
	libselinux.so.1 => /lib64/libselinux.so.1 (0x00007f05cbca6000)
undefined symbol: _ZTVN10__cxxabiv120__si_class_type_infoE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTVN10__cxxabiv117__class_type_infoE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_pure_virtual	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTVN10__cxxabiv121__vmi_class_type_infoE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTISt9exception	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTVSt15basic_streambufIcSt11char_traitsIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTVSt9exception	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTVSt18basic_stringstreamIcSt11char_traitsIcESaIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTVSt19basic_ostringstreamIcSt11char_traitsIcESaIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTIPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt4cerr	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSsD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt8ios_base4InitD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTVSt9basic_iosIcSt11char_traitsIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTTSt18basic_stringstreamIcSt11char_traitsIcESaIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTTSt19basic_ostringstreamIcSt11char_traitsIcESaIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTVSt15basic_stringbufIcSt11char_traitsIcESaIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs4_Rep20_S_empty_rep_storageE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __gxx_personality_v0	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs9push_backEc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs12find_last_ofEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt15basic_streambufIcSt11char_traitsIcEED2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs6assignERKSs	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSi10_M_extractIdEERSiRT_	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt6localeD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZStlsISt11char_traitsIcEERSt13basic_ostreamIcT_ES5_PKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_rethrow	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs7compareEPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSsC1EPKcmRKSaIcE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSsD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZdaPv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs7compareERKSs	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs17find_first_not_ofEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt8ios_base4InitC1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs6assignEPKcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _Znwm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt17__throw_bad_allocv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt18_Rb_tree_incrementPSt18_Rb_tree_node_base	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs4findEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt16__ostream_insertIcSt11char_traitsIcEERSt13basic_ostreamIT_T0_ES6_PKS3_l	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt20__throw_out_of_rangePKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_throw	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt9basic_iosIcSt11char_traitsIcEE4initEPSt15basic_streambufIcS1_E	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs6appendEPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZdlPv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs6resizeEm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs4_Rep10_M_destroyERKSaIcE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSsD2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt9basic_iosIcSt11char_traitsIcEED2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs17find_first_not_ofEcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt18_Rb_tree_decrementPKSt18_Rb_tree_node_base	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt9terminatev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt9exceptionD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_free_exception	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs6appendERKSs	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs14_M_replace_auxEmmmc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_get_exception_ptr	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt28_Rb_tree_rebalance_for_erasePSt18_Rb_tree_node_baseRS_	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs16find_last_not_ofEcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSsC2ERKSs	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_guard_abort	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSo9_M_insertIdEERSoT_	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt8ios_baseC2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs12_M_leak_hardEv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_guard_acquire	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs7replaceEmmPKcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs6appendEmc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_begin_catch	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs6resizeEmc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs6appendEPKcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs9_M_mutateEmmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSt15basic_stringbufIcSt11char_traitsIcESaIcEE3strEv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs7_M_leakEv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_end_catch	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs5rfindEcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_guard_release	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs6substrEmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs7replaceEmmPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt15_List_node_base4hookEPS_	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs7reserveEm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __cxa_allocate_exception	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSsC2EPKcRKSaIcE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt8ios_baseD2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt18_Rb_tree_decrementPSt18_Rb_tree_node_base	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs4_Rep9_S_createEmmRKSaIcE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSolsEi	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _Znam	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: __dynamic_cast	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt18_Rb_tree_incrementPKSt18_Rb_tree_node_base	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt19basic_ostringstreamIcSt11char_traitsIcESaIcEED1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs13find_first_ofEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt20__throw_length_errorPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt15basic_stringbufIcSt11char_traitsIcESaIcEE7_M_syncEPcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs2atEm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs4findEcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt9basic_iosIcSt11char_traitsIcEE5clearESt12_Ios_Iostate	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt18basic_stringstreamIcSt11char_traitsIcESaIcEED1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSsC1EPKcRKSaIcE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZSt19__throw_logic_errorPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs5rfindEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt9exceptionD2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSsC1ERKSs	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSt6localeC1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSsC1ERKSsmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNSs6assignEPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZNKSs16find_last_not_ofEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1)
undefined symbol: _ZTVN10__cxxabiv120__si_class_type_infoE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdaljni.so)
undefined symbol: _ZTVN10__cxxabiv117__class_type_infoE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdaljni.so)
undefined symbol: _ZNSt8ios_base4InitD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdaljni.so)
undefined symbol: __gxx_personality_v0	(/home/579/hxs579/apps/gdal-trunk/lib/libgdaljni.so)
undefined symbol: _ZNSt8ios_base4InitC1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdaljni.so)
undefined symbol: _Znwm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdaljni.so)
undefined symbol: _ZdlPv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdaljni.so)
undefined symbol: _Znam	(/home/579/hxs579/apps/gdal-trunk/lib/libgdaljni.so)

Printing libgdal.so dependencies, also encountering the same issue below:

$ ldd -d -r /home/579/hxs579/apps/gdal-trunk/lib/libgdal.so
	linux-vdso.so.1 =>  (0x00007ffff39ff000)
	libnetcdf.so.6 => /usr/lib64/libnetcdf.so.6 (0x00007fb65639b000)
	libhdf5.so.6 => /usr/lib64/libhdf5.so.6 (0x00007fb655db2000)
	libpq.so.5 => /usr/lib64/libpq.so.5 (0x00007fb655b8a000)
	libpthread.so.0 => /lib64/libpthread.so.0 (0x00007fb65596e000)
	libm.so.6 => /lib64/libm.so.6 (0x00007fb6556e9000)
	librt.so.1 => /lib64/librt.so.1 (0x00007fb6554e1000)
	libdl.so.2 => /lib64/libdl.so.2 (0x00007fb6552dd000)
	libcurl.so.4 => /usr/lib64/libcurl.so.4 (0x00007fb655089000)
	libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00007fb654e73000)
	libc.so.6 => /lib64/libc.so.6 (0x00007fb654ae3000)
	libhdf5_hl.so.6 => /usr/lib64/libhdf5_hl.so.6 (0x00007fb6548b0000)
	libz.so.1 => /lib64/libz.so.1 (0x00007fb65469a000)
	libssl.so.10 => /usr/lib64/libssl.so.10 (0x00007fb65443f000)
	libcrypto.so.10 => /usr/lib64/libcrypto.so.10 (0x00007fb6540a4000)
	libgssapi_krb5.so.2 => /lib64/libgssapi_krb5.so.2 (0x00007fb653e62000)
	libcrypt.so.1 => /lib64/libcrypt.so.1 (0x00007fb653c2b000)
	libldap_r-2.4.so.2 => /lib64/libldap_r-2.4.so.2 (0x00007fb6539d7000)
	/lib64/ld-linux-x86-64.so.2 (0x0000003ee4200000)
	libidn.so.11 => /lib64/libidn.so.11 (0x00007fb6537a5000)
	libldap-2.4.so.2 => /lib64/libldap-2.4.so.2 (0x00007fb65355a000)
	libkrb5.so.3 => /lib64/libkrb5.so.3 (0x00007fb65327a000)
	libk5crypto.so.3 => /lib64/libk5crypto.so.3 (0x00007fb65304e000)
	libcom_err.so.2 => /lib64/libcom_err.so.2 (0x00007fb652e4a000)
	libssl3.so => /usr/lib64/libssl3.so (0x00007fb652c0e000)
	libsmime3.so => /usr/lib64/libsmime3.so (0x00007fb6529e2000)
	libnss3.so => /usr/lib64/libnss3.so (0x00007fb6526a7000)
	libnssutil3.so => /usr/lib64/libnssutil3.so (0x00007fb652480000)
	libplds4.so => /lib64/libplds4.so (0x00007fb65227c000)
	libplc4.so => /lib64/libplc4.so (0x00007fb652077000)
	libnspr4.so => /lib64/libnspr4.so (0x00007fb651e39000)
	libssh2.so.1 => /usr/lib64/libssh2.so.1 (0x00007fb651c12000)
	libkrb5support.so.0 => /lib64/libkrb5support.so.0 (0x00007fb651a06000)
	libkeyutils.so.1 => /lib64/libkeyutils.so.1 (0x00007fb651803000)
	libresolv.so.2 => /lib64/libresolv.so.2 (0x00007fb6515e9000)
	libfreebl3.so => /lib64/libfreebl3.so (0x00007fb651386000)
	liblber-2.4.so.2 => /lib64/liblber-2.4.so.2 (0x00007fb651177000)
	libsasl2.so.2 => /usr/lib64/libsasl2.so.2 (0x00007fb650f5d000)
	libselinux.so.1 => /lib64/libselinux.so.1 (0x00007fb650d3d000)
undefined symbol: _ZTVN10__cxxabiv120__si_class_type_infoE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTVN10__cxxabiv117__class_type_infoE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_pure_virtual	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTVN10__cxxabiv121__vmi_class_type_infoE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTISt9exception	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTVSt15basic_streambufIcSt11char_traitsIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTVSt9exception	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTVSt18basic_stringstreamIcSt11char_traitsIcESaIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTVSt19basic_ostringstreamIcSt11char_traitsIcESaIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTIPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt4cerr	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSsD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt8ios_base4InitD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTVSt9basic_iosIcSt11char_traitsIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTTSt18basic_stringstreamIcSt11char_traitsIcESaIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTTSt19basic_ostringstreamIcSt11char_traitsIcESaIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZTVSt15basic_stringbufIcSt11char_traitsIcESaIcEE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs4_Rep20_S_empty_rep_storageE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __gxx_personality_v0	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs9push_backEc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs12find_last_ofEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt15basic_streambufIcSt11char_traitsIcEED2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs6assignERKSs	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSi10_M_extractIdEERSiRT_	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt6localeD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZStlsISt11char_traitsIcEERSt13basic_ostreamIcT_ES5_PKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_rethrow	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs7compareEPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSsC1EPKcmRKSaIcE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSsD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZdaPv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs7compareERKSs	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs17find_first_not_ofEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt8ios_base4InitC1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs6assignEPKcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _Znwm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt17__throw_bad_allocv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt18_Rb_tree_incrementPSt18_Rb_tree_node_base	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs4findEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt16__ostream_insertIcSt11char_traitsIcEERSt13basic_ostreamIT_T0_ES6_PKS3_l	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt20__throw_out_of_rangePKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_throw	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt9basic_iosIcSt11char_traitsIcEE4initEPSt15basic_streambufIcS1_E	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs6appendEPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZdlPv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs6resizeEm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs4_Rep10_M_destroyERKSaIcE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSsD2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt9basic_iosIcSt11char_traitsIcEED2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs17find_first_not_ofEcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt18_Rb_tree_decrementPKSt18_Rb_tree_node_base	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt9terminatev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt9exceptionD1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_free_exception	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs6appendERKSs	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs14_M_replace_auxEmmmc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_get_exception_ptr	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt28_Rb_tree_rebalance_for_erasePSt18_Rb_tree_node_baseRS_	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs16find_last_not_ofEcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSsC2ERKSs	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_guard_abort	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSo9_M_insertIdEERSoT_	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt8ios_baseC2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs12_M_leak_hardEv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_guard_acquire	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs7replaceEmmPKcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs6appendEmc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_begin_catch	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs6resizeEmc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs6appendEPKcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs9_M_mutateEmmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSt15basic_stringbufIcSt11char_traitsIcESaIcEE3strEv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs7_M_leakEv	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_end_catch	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs5rfindEcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_guard_release	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs6substrEmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs7replaceEmmPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt15_List_node_base4hookEPS_	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs7reserveEm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __cxa_allocate_exception	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSsC2EPKcRKSaIcE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt8ios_baseD2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt18_Rb_tree_decrementPSt18_Rb_tree_node_base	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs4_Rep9_S_createEmmRKSaIcE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSolsEi	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _Znam	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: __dynamic_cast	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt18_Rb_tree_incrementPKSt18_Rb_tree_node_base	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt19basic_ostringstreamIcSt11char_traitsIcESaIcEED1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs13find_first_ofEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt20__throw_length_errorPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt15basic_stringbufIcSt11char_traitsIcESaIcEE7_M_syncEPcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs2atEm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs4findEcm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt9basic_iosIcSt11char_traitsIcEE5clearESt12_Ios_Iostate	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt18basic_stringstreamIcSt11char_traitsIcESaIcEED1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSsC1EPKcRKSaIcE	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZSt19__throw_logic_errorPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs5rfindEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt9exceptionD2Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSsC1ERKSs	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSt6localeC1Ev	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSsC1ERKSsmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNSs6assignEPKc	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)
undefined symbol: _ZNKSs16find_last_not_ofEPKcmm	(/home/579/hxs579/apps/gdal-trunk/lib/libgdal.so)

----- Original Message -----
> From: "Even Rouault" <even.rouault at mines-paris.org>
> To: "Hendy Sumanto" <hsumanto at vpac.org>
> Cc: "gdal-dev" <gdal-dev at lists.osgeo.org>
> Sent: Friday, 21 September, 2012 9:23:44 PM
> Subject: Re: [gdal-dev] GDAL / Java bindings : undefined symbol: _ZTVN10__cxxabiv120__si_class_type_infoE in
> libgdal.so.1
> Seeing
> 
> > java.lang.UnsatisfiedLinkError:
> > /home/579/hxs579/local/gdal-trunk/gdal/swig/java/libgdaljni.so:
> > /home/579/hxs579/apps/gdal-trunk/lib/libgdal.so.1: undefined symbol:
> 
> You need to add /home/579/hxs579/apps/gdal-trunk/lib in your
> LD_LIBRARY_PATH too
> (in addition to the existing values in it).
> 
> Reading
> http://trac.osgeo.org/gdal/wiki/GdalOgrInJavaBuildInstructionsUnix , I
> see it wasn't mentionned.

[gdal-dev] GDAL / Java bindings : undefined symbol: _ZTVN10__cxxabiv120__si_class_type_infoE in libgdal.so.1

[gdal-dev] GDAL / Java bindings : undefined symbol: _ZTVN10cxxabiv120si_class_type_infoE in libgdal.so.1