[GRASS-stats] Re: Problem with v.distance in spgrass6 package in R
Rainer M Krug
r.m.krug at gmail.com
Thu Nov 3 07:18:16 EDT 2011
On Thu, Nov 3, 2011 at 11:57 AM, toke <tepp at life.ku.dk> wrote:
> Hi tanks for your interest
>
> Im still not able to make it work. It must be the programs I am using which
> do not comply.
>
> Im using
> R version 2.14.0
> And
> Grass 6.4.1
> And
> Ubunutu 11.10
>
> All installed recently installed. I will let you know if I find the
> problem.
>
Sorry - came late to the discussion, but it seems to work here to - but
please check:
Same configuration - Ubuntu Oneiric, here is the transcript:
GRASS 6.4.1 (spearfish60):~ > R
R version 2.14.0 (2011-10-31)
Copyright (C) 2011 The R Foundation for Statistical Computing
ISBN 3-900051-07-0
Platform: i686-pc-linux-gnu (32-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
[Previously saved workspace restored]
> library(spgrass6)
Loading required package: sp
Loading required package: rgdal
Geospatial Data Abstraction Library extensions to R successfully loaded
Loaded GDAL runtime: GDAL 1.8.1, released 2011/07/09
Path to GDAL shared files: /home/rkrug/share/gdal
Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September 2009, [PJ_VERSION: 470]
Path to PROJ.4 shared files: (autodetected)
Loading required package: XML
GRASS GIS interface loaded with GRASS version: GRASS 6.4.1 (2011)
and location: spearfish60
> gmeta6()
gisdbase /home/rkrug/Downloads
location spearfish60
mapset user1
rows 477
columns 634
north 4928010
south 4913700
west 589980
east 609000
nsres 30
ewres 30
projection +proj=utm +zone=13 +a=6378206.4 +rf=294.9786982 +no_defs
+nadgrids=/home/rkrug/grass-6.4.1/etc/nad/conus +to_meter=1.0
> fields1<-readVECT6("fields1")
Available OGR Drivers:
WARNING: The map contains islands. To preserve them in the output map, use
the -c flag
Exporting 65 areas (may take some time)...
100%
67 features written
OGR data source with driver: ESRI Shapefile
Source: "/home/rkrug/Downloads/spearfish60/user1/.tmp/ecolmod", layer:
"fields1"
with 67 features and 2 fields
Feature type: wkbPolygon with 2 dimensions
> archsites1<-readVECT6("archsites1")
Available OGR Drivers:
Exporting 25 points/lines...
100%
25 features written
OGR data source with driver: ESRI Shapefile
Source: "/home/rkrug/Downloads/spearfish60/user1/.tmp/ecolmod", layer:
"archsite"
with 25 features and 3 fields
Feature type: wkbPoint with 2 dimensions
> archsites1
coordinates cat str1 fields
1 (593493, 4914730) 1 Signature Rock NA
2 (591950, 4923000) 2 No Name NA
3 (589860, 4922000) 3 Canyon Station NA
4 (590400, 4922820) 4 Spearfish Creek NA
5 (593549, 4925500) 5 No Name NA
6 (600375, 4925240) 6 Prairie Site NA
7 (606635, 4920770) 7 Jensen Pass NA
8 (595755, 4925300) 8 No Name NA
9 (601000, 4926310) 9 No Name NA
10 (602550, 4917370) 10 Slaughterhouse Gulch NA
11 (591635, 4924340) 11 No Name NA
12 (603000, 4925250) 12 Elkhorn Peak NA
13 (592100, 4921200) 13 No Name NA
14 (592600, 4922000) 14 No Name NA
15 (604194, 4925980) 15 No Name NA
16 (608200, 4915900) 16 Boulder Creek Cabin NA
17 (601400, 4925450) 17 Ridge NA
18 (591000, 4916000) 18 Cole Creek Mine NA
19 (607150, 4916650) 19 No Name NA
20 (593690, 4914480) 20 No Name NA
21 (608355, 4926490) 21 Whitewood Flats NA
22 (597945, 4918950) 22 Bob Miller NA
23 (607159, 4917000) 23 No Name NA
24 (591583, 4925280) 24 Hanson Ranch NA
25 (602580, 4918480) 25 No Name NA
> set.echoCmdOption(TRUE)
[1] FALSE
> set.echoCmdOption(TRUE)
[1] TRUE
> execGRASS("v.distance", from="archsites1", to="fields1",
from_type="point", to_type="point,line,area", dmax=as.integer(1),
upload="to_attr", column="fields", to_column="cat")
GRASS command: v.distance from=archsites1 to=fields1 from_type=point
to_type=point,line,area dmax=1 upload=to_attr column=fields to_column=cat
100%
100%
100%
25 categories read from the map
25 categories exist in the table
25 categories read from the map exist in the table
25 records updated
v.distance complete.
> execGRASS("v.distance", flags="p", from="archsites1",
+ to="fields1", from_type="point", to_type="point,line,area",
+ dmax=as.integer(1),
+ upload="to_attr", column="fields", to_column="cat")
GRASS command: v.distance -p from=archsites1 to=fields1 from_type=point
to_type=point,line,area dmax=1 upload=to_attr column=fields to_column=cat
100%
100%
100%
from_cat|fields
1|63
2|63
3|63
4|63
5|null
6|null
7|null
8|null
9|25
10|63
11|null
12|null
13|63
14|63
15|null
16|63
17|null
18|63
19|63
20|63
21|null
22|63
23|63
24|null
25|63
v.distance complete.
> execGRASS("v.distance", flags="p", from="archsites1", to="fields1",
+
+ from_type="point", to_type="point,line,area", dmax=as.integer(1),
upload="to_attr", column="fields", to_column="cat")
GRASS command: v.distance -p from=archsites1 to=fields1 from_type=point
to_type=point,line,area dmax=1 upload=to_attr column=fields to_column=cat
100%
100%
100%
from_cat|fields
1|63
2|63
3|63
4|63
5|null
6|null
7|null
8|null
9|25
10|63
11|null
12|null
13|63
14|63
15|null
16|63
17|null
18|63
19|63
20|63
21|null
22|63
23|63
24|null
25|63
v.distance complete.
> sessionInfo()
R version 2.14.0 (2011-10-31)
Platform: i686-pc-linux-gnu (32-bit)
locale:
[1] LC_CTYPE=en_GB.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_GB.UTF-8 LC_COLLATE=en_GB.UTF-8
[5] LC_MONETARY=en_GB.UTF-8 LC_MESSAGES=en_GB.UTF-8
[7] LC_PAPER=C LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_GB.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] spgrass6_0.7-4 XML_3.4-3 rgdal_0.7-1 sp_0.9-91
loaded via a namespace (and not attached):
[1] grid_2.14.0 lattice_0.19-33
> q()
Save workspace image? [y/n/c]: n
GRASS 6.4.1 (spearfish60):~ >
> Cheers Toke
>
>
>
> --
> View this message in context:
> http://osgeo-org.1803224.n2.nabble.com/Problem-with-v-distance-in-spgrass6-package-in-R-tp6939286p6958600.html
> Sent from the Grass - Stats mailing list archive at Nabble.com.
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--
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology,
UCT), Dipl. Phys. (Germany)
Centre of Excellence for Invasion Biology
Stellenbosch University
South Africa
Tel : +33 - (0)9 53 10 27 44
Cell: +33 - (0)6 85 62 59 98
Fax (F): +33 - (0)9 58 10 27 44
Fax (D): +49 - (0)3 21 21 25 22 44
email: Rainer at krugs.de
Skype: RMkrug
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