<p dir="ltr">Hi Willem,</p>
<p dir="ltr">What do you mean by 58% overlap?</p>
<p dir="ltr">Best,<br>
Steve</p>
<div class="gmail_quote">On May 17, 2015 2:59 PM, "Willem Buitendyk" <<a href="mailto:willem@pcfish.ca">willem@pcfish.ca</a>> wrote:<br type="attribution"><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word">Hi Steve,<div><br></div><div>I agree with your assessment however I’m not sure how to rectify it. Here what I can tell you:</div><div><br></div><div>The folder contains all of my images with key.bin and key.gz along with all of the subfolders like bundles,matching,pmvs,odm_meshing, etc. The camera is a Canon A2400 IS which I’ve added to the json file using: 6.17</div><div><br></div><div>Images are all geotagged using high res GPS taken from pixhawk flight controller. All images display properly using a program like Palantir. The overlap is about 58%. Exposure is adjusted and the images are actually quite good.</div><div><br></div><div><div>Here is the output from running the command:</div><div><br></div><div><br></div><div> - running pmvs - Sun May 17 11:40:28 PDT 2015</div><div><br></div><div><br></div><div>--------------------------------------------------</div><div>--- Summary of specified options ---</div><div># of timages: 2 (enumeration)</div><div># of oimages: 0 (enumeration)</div><div>level: 1 csize: 2</div><div>threshold: 0.7 wsize: 7</div><div>minImageNum: 3 CPU: 8</div><div>useVisData: 1 sequence: -1</div><div>--------------------------------------------------</div><div>Reading images: **</div><div>0 Harris running ...1 Harris running ...2663 harris done</div><div>2713 harris done</div><div>DoG running...DoG running...4255 dog done</div><div>4255 dog done</div><div>done</div><div>adding seeds </div><div>(0,0)(1,0)done</div><div>---- Initial: 0 secs ----</div><div>Total pass fail0 fail1 refinepatch: 12070 0 12070 0 0</div><div>Total pass fail0 fail1 refinepatch: 100 0 100 0 0</div><div>Expanding patches...</div><div>---- EXPANSION: 0 secs ----</div><div>Total pass fail0 fail1 refinepatch: 0 0 0 0 0</div><div>Total pass fail0 fail1 refinepatch: -nan -nan -nan -nan -nan</div><div>FilterOutside</div><div>mainbody: </div><div>Gain (ave/var): 0 0</div><div>0 -> 0 (-nan%)<span style="white-space:pre-wrap"> </span>0 secs</div><div>Filter Exact: **</div><div>0 -> 0 (-nan%)<span style="white-space:pre-wrap"> </span>0 secs</div><div>FilterNeighbor:<span style="white-space:pre-wrap"> </span>FilterGroups:<span style="white-space:pre-wrap"> </span>STATUS: 0 0 0 0 0 0 0 0 0 0 </div><div>0 0 0 0 0 0 0 0 0 0 </div><div>0 0 0 0 0 0 0 0 0 0 </div><div>0 0 0 0 0 </div><div>Expanding patches...</div><div>---- EXPANSION: 0 secs ----</div><div>Total pass fail0 fail1 refinepatch: 0 0 0 0 0</div><div>Total pass fail0 fail1 refinepatch: -nan -nan -nan -nan -nan</div><div>FilterOutside</div><div>mainbody: </div><div>Gain (ave/var): 0 0</div><div>0 -> 0 (-nan%)<span style="white-space:pre-wrap"> </span>0 secs</div><div>Filter Exact: **</div><div>0 -> 0 (-nan%)<span style="white-space:pre-wrap"> </span>0 secs</div><div>FilterNeighbor:<span style="white-space:pre-wrap"> </span>FilterGroups:<span style="white-space:pre-wrap"> </span>STATUS: 0 0 0 0 0 0 0 0 0 0 </div><div>0 0 0 0 0 0 0 0 0 0 </div><div>0 0 0 0 0 0 0 0 0 0 </div><div>0 0 0 0 0 </div><div>Expanding patches...</div><div>---- EXPANSION: 0 secs ----</div><div>Total pass fail0 fail1 refinepatch: 0 0 0 0 0</div><div>Total pass fail0 fail1 refinepatch: -nan -nan -nan -nan -nan</div><div>FilterOutside</div><div>mainbody: </div><div>Gain (ave/var): 0 0</div><div>0 -> 0 (-nan%)<span style="white-space:pre-wrap"> </span>0 secs</div><div>Filter Exact: **</div><div>0 -> 0 (-nan%)<span style="white-space:pre-wrap"> </span>0 secs</div><div>FilterNeighbor:<span style="white-space:pre-wrap"> </span>FilterGroups:<span style="white-space:pre-wrap"> </span>STATUS: 0 0 0 0 0 0 0 0 0 0 </div><div>0 0 0 0 0 0 0 0 0 0 </div><div>0 0 0 0 0 0 0 0 0 0 </div><div>0 0 0 0 0 </div><div>---- Total: 0 secs ----</div><div><br></div><div><br></div><div> - running meshing - Sun May 17 11:40:31 PDT 2015</div><div><br></div><div><br></div><div>[pcl::KdTreeFLANN::setInputCloud] Cannot create a KDTree with an empty input cloud!</div><div>[WARNING] Initial residual too low: 0 < 0.000001</div><div>[WARNING] Initial residual too low: 0 < 0.000001</div><div>[WARNING] Initial residual too low: 0 < 0.000001</div><div>[WARNING] Initial residual too low: 0 < 0.000001</div><div>[WARNING] Initial residual too low: 0 < 0.000001</div><div>[pcl::io::savePLYFile] Input point cloud has no data!</div><div>Error in OdmMeshing:</div><div>Error when saving mesh to file:</div><div>/home/willem/lake_survey_exp_geo/reconstruction-with-image-size-2400-results/odm_mesh-0000.ply</div><div><br></div><div>For more detailed information, see log file.</div><div><br></div><div><br></div><div>quitting cause: </div><div><span style="white-space:pre-wrap"> </span>"/home/willem/OpenDroneMap/bin/odm_meshing" -inputFile /home/willem/lake_survey_exp_geo/reconstruction-with-image-size-2400-results/option-0000.ply -outputFile /home/willem/lake_survey_exp_geo/reconstruction-with-image-size-2400-results/odm_mesh-0000.ply -logFile /home/willem/lake_survey_exp_geo/reconstruction-with-image-size-2400/odm_meshing/odm_meshing_log.txt -maxVertexCount 100000 -octreeDepth 9 -samplesPerNode 1</div><div>returned with code 256</div><div>willem@pcfish-main:~/lake_survey_exp_geo$</div></div><div><br><div>
<div>Willem Buitendyk</div><div><br></div><br>
</div>
<br><div><blockquote type="cite"><div>On May 14, 2015, at 6:45 PM, Stephen Mather <<a href="mailto:stephen@smathermather.com" target="_blank">stephen@smathermather.com</a>> wrote:</div><br><div><div dir="ltr"><div><div><div><div>Hi Willem,<br><br></div>It seems you aren't getting a point cloud from the PMVS step, so when it goes to mesh, it has nothing to mesh. What is in your reconstruction-with-image-size-2400 folder? Also, what kind of camera are the images from?<br><br></div>Thanks,<br></div>Best,<br></div>Steve<br><br><br><div><div><div><div><br></div></div></div></div></div><div class="gmail_extra"><br><div class="gmail_quote">On Tue, May 12, 2015 at 3:49 PM, Willem Buitendyk <span dir="ltr"><<a href="mailto:willem@pcfish.ca" target="_blank">willem@pcfish.ca</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word">I should note that this was originally on ubuntu running on parallels. This time I tried it on a dedicated server running ubuntu 14.04 and received the same error. There appears to be something wrong with the toolchain.<div><br></div><div>My process was:</div><div><br></div><div>git clone <a href="https://github.com/OpenDroneMap/OpenDroneMap.git" target="_blank">https://github.com/OpenDroneMap/OpenDroneMap.git</a></div><div><br></div><div>install.sh</div><div><br></div><div>~/OpenDroneMap/./<a href="http://run.pl/" target="_blank">run.pl</a> from within my folder located at ~/house_survey</div><span><font color="#888888"><div><br></div></font></span><div><span><font color="#888888"><br><div>
<div>Willem Buitendyk</div><div><br></div><br>
</div></font></span><span>
<br><div><blockquote type="cite"><div>On May 12, 2015, at 11:05 AM, Willem Buitendyk <<a href="mailto:willem@pcfish.ca" target="_blank">willem@pcfish.ca</a>> wrote:</div><br><div>Hi there,<br><br>Ubuntu 14.04. I’ve installed the latest opendronemap. When I use the <a href="http://run.pl/" target="_blank">run.pl</a> command everything seems to work up until I receive the following error:<br><br> - running meshing - Tue May 12 10:53:27 PDT 2015<br><br><br>[pcl::KdTreeFLANN::setInputCloud] Cannot create a KDTree with an empty input cloud!<br>[WARNING] Initial residual too low: 0 < 0.000001<br>[WARNING] Initial residual too low: 0 < 0.000001<br>[WARNING] Initial residual too low: 0 < 0.000001<br>[WARNING] Initial residual too low: 0 < 0.000001<br>[WARNING] Initial residual too low: 0 < 0.000001<br>[pcl::io::savePLYFile] Input point cloud has no data!<br>Error in OdmMeshing:<br>Error when saving mesh to file:<br>/home/willem/house_survey/reconstruction-with-image-size-2400-results/odm_mesh-0000.ply<br><br>For more detailed information, see log file.<br><br><br>quitting cause: <br><span style="white-space:pre-wrap"> </span>"/home/willem/OpenDroneMap/bin/odm_meshing" -inputFile /home/willem/house_survey/reconstruction-with-image-size-2400-results/option-0000.ply -outputFile /home/willem/house_survey/reconstruction-with-image-size-2400-results/odm_mesh-0000.ply -logFile /home/willem/house_survey/reconstruction-with-image-size-2400/odm_meshing/odm_meshing_log.txt -maxVertexCount 100000 -octreeDepth 9 -samplesPerNode 1<br>returned with code 256<br>willem@ubuntu:~/house_survey$ <br><br><br>Willem Buitendyk<br><br><br><br></div></blockquote></div><br></span></div></div><br>_______________________________________________<br>
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