[pdal-commits] [PDAL/PDAL] 655403: Copy icebridge files over to hdf plugin
Howard Butler
noreply at github.com
Wed Feb 12 11:24:43 PST 2020
Branch: refs/heads/hdf
Home: https://github.com/PDAL/PDAL
Commit: 655403687383ec8b50e9acfc504e6b9ef028905e
https://github.com/PDAL/PDAL/commit/655403687383ec8b50e9acfc504e6b9ef028905e
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-16 (Thu, 16 Jan 2020)
Changed paths:
M cmake/options.cmake
M plugins/CMakeLists.txt
A plugins/hdf/CMakeLists.txt
A plugins/hdf/io/Hdf5Handler.cpp
A plugins/hdf/io/Hdf5Handler.hpp
A plugins/hdf/io/HdfReader.cpp
A plugins/hdf/io/HdfReader.hpp
A plugins/hdf/test/HdfReadertest.cpp
Log Message:
-----------
Copy icebridge files over to hdf plugin
Commit: 226b1cdc8314e5d35a4d483b91c9d7019f070b5d
https://github.com/PDAL/PDAL/commit/226b1cdc8314e5d35a4d483b91c9d7019f070b5d
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-27 (Mon, 27 Jan 2020)
Changed paths:
M plugins/hdf/CMakeLists.txt
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/HdfReader.cpp
M plugins/hdf/io/HdfReader.hpp
M plugins/hdf/test/HdfReadertest.cpp
Log Message:
-----------
WIP
Print out info from hard-coded autzen. remove test points in test file. iterate over dimensions and print size, offset, type and endianness
Commit: c4ce3d2d2faf19ec54156cf0495a5bc96b8294f9
https://github.com/PDAL/PDAL/commit/c4ce3d2d2faf19ec54156cf0495a5bc96b8294f9
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-27 (Mon, 27 Jan 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
Log Message:
-----------
Remove unused
Commit: b81353efb98cb455d1e5c355319b2c0c2ee1865c
https://github.com/PDAL/PDAL/commit/b81353efb98cb455d1e5c355319b2c0c2ee1865c
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-28 (Tue, 28 Jan 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
M plugins/hdf/io/HdfReader.hpp
Log Message:
-----------
Compiles!
Commit: 3eb420d429ad65885d87069fba28751b74c69fb3
https://github.com/PDAL/PDAL/commit/3eb420d429ad65885d87069fba28751b74c69fb3
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-29 (Wed, 29 Jan 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
M plugins/hdf/io/HdfReader.hpp
Log Message:
-----------
Reads!
Commit: 7cd36a6e0abdd25c991f7c35e6576055d1f2791e
https://github.com/PDAL/PDAL/commit/7cd36a6e0abdd25c991f7c35e6576055d1f2791e
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-30 (Thu, 30 Jan 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
Log Message:
-----------
Fix offset calculation
Commit: 946fb64c4e80ed0231be2f6affd8e47457cafed7
https://github.com/PDAL/PDAL/commit/946fb64c4e80ed0231be2f6affd8e47457cafed7
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-30 (Thu, 30 Jan 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
Fix hard coded struct size
Commit: 929fc3f68060a6ef2eeddcf19a50ffdf21b1d2e1
https://github.com/PDAL/PDAL/commit/929fc3f68060a6ef2eeddcf19a50ffdf21b1d2e1
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-30 (Thu, 30 Jan 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
Log Message:
-----------
Fix hard coded number of points
Commit: 800712e29c88a8e688c24960a6c4aca88af3e8fe
https://github.com/PDAL/PDAL/commit/800712e29c88a8e688c24960a6c4aca88af3e8fe
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-30 (Thu, 30 Jan 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
Remove hard coded dataset name, add dataset selection from stage options
Commit: 19cae8a6c9f54f1b0b410ed3ba15c81e2efc0eb6
https://github.com/PDAL/PDAL/commit/19cae8a6c9f54f1b0b410ed3ba15c81e2efc0eb6
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-30 (Thu, 30 Jan 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
Log Message:
-----------
Add case for non-compound datatypes
Commit: 623777428849ed52713632ceda53c86df5c9cb07
https://github.com/PDAL/PDAL/commit/623777428849ed52713632ceda53c86df5c9cb07
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-01-31 (Fri, 31 Jan 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
Log Message:
-----------
Fix compound case
Commit: 8d4b4199b45aa47f3a45131015cbfba195dff8b8
https://github.com/PDAL/PDAL/commit/8d4b4199b45aa47f3a45131015cbfba195dff8b8
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-04 (Tue, 04 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
Log Message:
-----------
Remove code for compound types
Commit: fb4254307dd2d30a39bb0a331262f832a0806ab5
https://github.com/PDAL/PDAL/commit/fb4254307dd2d30a39bb0a331262f832a0806ab5
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-04 (Tue, 04 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
M plugins/hdf/io/HdfReader.hpp
Log Message:
-----------
Add ability to name dataset
Commit: f7e62a28cf78f64426f294beaaab2fa950ed57d8
https://github.com/PDAL/PDAL/commit/f7e62a28cf78f64426f294beaaab2fa950ed57d8
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-06 (Thu, 06 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
Cleanup
Commit: 408fed567aadb1f38876dd08d01376a30b26354a
https://github.com/PDAL/PDAL/commit/408fed567aadb1f38876dd08d01376a30b26354a
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-06 (Thu, 06 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
Log Message:
-----------
Fix type bug
Commit: c865e880c10dcf0b05e9b7b9ba258ab62d2b12b5
https://github.com/PDAL/PDAL/commit/c865e880c10dcf0b05e9b7b9ba258ab62d2b12b5
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-07 (Fri, 07 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
Reads one chunk - wip
Commit: 1dc6ce367922f17116237b2d008df6d446c015e2
https://github.com/PDAL/PDAL/commit/1dc6ce367922f17116237b2d008df6d446c015e2
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-07 (Fri, 07 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
WIP
Commit: b079046dc0315c4d7db747a4bc5d583163a50e72
https://github.com/PDAL/PDAL/commit/b079046dc0315c4d7db747a4bc5d583163a50e72
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-07 (Fri, 07 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
No longer segfaults - wip
Commit: bcd8c3aeea62590032593a18c07f33aee4174762
https://github.com/PDAL/PDAL/commit/bcd8c3aeea62590032593a18c07f33aee4174762
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-07 (Fri, 07 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
Reads an entire array
Commit: 63ace00706596a3eb766296da8c7b2dc9c543dc7
https://github.com/PDAL/PDAL/commit/63ace00706596a3eb766296da8c7b2dc9c543dc7
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-07 (Fri, 07 Feb 2020)
Changed paths:
M plugins/hdf/CMakeLists.txt
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/HdfReader.cpp
M plugins/hdf/io/HdfReader.hpp
Log Message:
-----------
Add JSON
Commit: 6f1202171ac3ca7937e040936678e2ffcef9ad17
https://github.com/PDAL/PDAL/commit/6f1202171ac3ca7937e040936678e2ffcef9ad17
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-07 (Fri, 07 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
Read dataset and dims from JSON map
Commit: aac7c0c73e5bb67ae3f17b070f6e26ccb8a21a63
https://github.com/PDAL/PDAL/commit/aac7c0c73e5bb67ae3f17b070f6e26ccb8a21a63
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-07 (Fri, 07 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
WIP
Commit: 1ef7923712f85c380226636fd4bc5bd6b9c6aa74
https://github.com/PDAL/PDAL/commit/1ef7923712f85c380226636fd4bc5bd6b9c6aa74
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-07 (Fri, 07 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
Remove unused
Commit: c017b1f1b665f794ce5ff92a9ddc3b2eb9134857
https://github.com/PDAL/PDAL/commit/c017b1f1b665f794ce5ff92a9ddc3b2eb9134857
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-07 (Fri, 07 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
M plugins/hdf/io/HdfReader.hpp
Log Message:
-----------
Cleanup
Commit: c138fb751043c63cef3bafd8f9889784fdab2724
https://github.com/PDAL/PDAL/commit/c138fb751043c63cef3bafd8f9889784fdab2724
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-10 (Mon, 10 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
Log Message:
-----------
Fix key-value misordering
Commit: 89dc09f52334f5e73386b59fabd2e085e1c4be5f
https://github.com/PDAL/PDAL/commit/89dc09f52334f5e73386b59fabd2e085e1c4be5f
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-10 (Mon, 10 Feb 2020)
Changed paths:
M .gitattributes
M CMakeLists.txt
M apps/CMakeLists.txt
M azure-pipelines.yml
R cmake/sqlite.cmake
M doc/references.rst
A doc/stages/filters.dbscan.rst
M doc/stages/filters.python.rst
M doc/stages/filters.rst
M doc/stages/filters.transformation.rst
M doc/stages/readers.numpy.rst
M doc/stages/readers.text.rst
M filters/ClusterFilter.cpp
M filters/ClusterFilter.hpp
A filters/DBSCANFilter.cpp
A filters/DBSCANFilter.hpp
M filters/ELMFilter.cpp
M filters/HAGFilter.cpp
M filters/OutlierFilter.cpp
M filters/PMFFilter.cpp
M filters/SMRFilter.cpp
M filters/SkewnessBalancingFilter.cpp
M io/LasHeader.cpp
M io/PcdReader.cpp
M kernels/InfoKernel.cpp
M pdal/GDALUtils.cpp
M pdal/Geometry.hpp
M pdal/KDIndex.hpp
M pdal/Polygon.hpp
M pdal/StageExtensions.cpp
M pdal/pdal_types.hpp
M pdal/util/Uuid.hpp
M plugins/CMakeLists.txt
M plugins/e57/CMakeLists.txt
M plugins/e57/io/Utils.cpp
M plugins/e57/libE57Format/CMakeLists.txt
R plugins/e57/libE57Format/cmake/Modules/CMakeGenerateDocumentation.cmake
R plugins/e57/libE57Format/cmake/Modules/FindICU.cmake
R plugins/e57/libE57Format/cmake/Modules/Tags.cmake
R plugins/e57/libE57Format/cmake/c_flag_overrides.cmake
R plugins/e57/libE57Format/cmake/cxx_flag_overrides.cmake
M plugins/e57/libE57Format/src/CheckedFile.cpp
M plugins/e57/libE57Format/src/E57Exception.cpp
M plugins/i3s/lepcc/src/ClusterRGB.cpp
M plugins/i3s/lepcc/src/ClusterRGB.h
M plugins/i3s/lepcc/src/Huffman.cpp
M plugins/i3s/lepcc/src/include/lepcc_types.h
M plugins/matlab/filters/Environment.cpp
R plugins/python/CMakeLists.txt
R plugins/python/filters/CMakeLists.txt
R plugins/python/filters/PythonFilter.cpp
R plugins/python/filters/PythonFilter.hpp
R plugins/python/io/CMakeLists.txt
R plugins/python/io/NumpyReader.cpp
R plugins/python/io/NumpyReader.hpp
R plugins/python/plang/Environment.cpp
R plugins/python/plang/Environment.hpp
R plugins/python/plang/Invocation.cpp
R plugins/python/plang/Invocation.hpp
R plugins/python/plang/Redirector.cpp
R plugins/python/plang/Redirector.hpp
R plugins/python/plang/Script.cpp
R plugins/python/plang/Script.hpp
R plugins/python/test/NumpyReaderTest.cpp
R plugins/python/test/PythonFilterTest.cpp
R plugins/python/test/make-test-data.py
M plugins/rdb/CMakeLists.txt
R plugins/sqlite/CMakeLists.txt
R plugins/sqlite/io/SQLiteCommon.cpp
R plugins/sqlite/io/SQLiteCommon.hpp
R plugins/sqlite/io/SQLiteReader.cpp
R plugins/sqlite/io/SQLiteReader.hpp
R plugins/sqlite/io/SQLiteWriter.cpp
R plugins/sqlite/io/SQLiteWriter.hpp
R plugins/sqlite/test/SQLiteTest.cpp
M plugins/tiledb/CMakeLists.txt
M scripts/azp/doc.yml
A scripts/azp/linux-conda.yml
M scripts/azp/linux.yml
M scripts/azp/osx.yml
M scripts/azp/win.yml
M scripts/ci/script.sh
M scripts/conda/osx.sh
M scripts/conda/win64-setup.bat
M scripts/conda/win64.bat
M scripts/docker/ubuntu/Dockerfile
A test/data/filters/elm2.txt
A test/data/plang/threedim.py
M test/unit/apps/InfoTest.cpp
M test/unit/filters/AssignFilterTest.cpp
M test/unit/filters/ELMFilterTest.cpp
M test/unit/filters/HAGFilterTest.cpp
M test/unit/filters/OverlayFilterTest.cpp
M test/unit/filters/SMRFilterTest.cpp
M test/unit/filters/SkewnessFilterTest.cpp
M test/unit/io/EptAddonWriterTest.cpp
M test/unit/io/TerrasolidReaderTest.cpp
M tools/lasdump/Header.cpp
M tools/nitfwrap/NitfWrap.cpp
M vendor/eigen/Eigen/src/Core/ArrayWrapper.h
M vendor/eigen/Eigen/src/Core/util/XprHelper.h
M vendor/pdalboost/boost/iostreams/detail/adapter/concept_adapter.hpp
M vendor/pdalboost/boost/iostreams/detail/functional.hpp
Log Message:
-----------
Merge branch 'master' of https://github.com/PDAL/PDAL into hdf
Commit: 87a02862436116b5bc4f07f00471e9242e4a1946
https://github.com/PDAL/PDAL/commit/87a02862436116b5bc4f07f00471e9242e4a1946
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-12 (Wed, 12 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/Hdf5Handler.hpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
Works for multiple dims
Commit: 91323316a1a8d811e4c305ac9ba85ef2de42017f
https://github.com/PDAL/PDAL/commit/91323316a1a8d811e4c305ac9ba85ef2de42017f
Author: Ryan Pals <ryan at hobu.co>
Date: 2020-02-12 (Wed, 12 Feb 2020)
Changed paths:
M plugins/hdf/io/Hdf5Handler.cpp
M plugins/hdf/io/HdfReader.cpp
Log Message:
-----------
Use proper loggers
Commit: 6f43b31f85a5b62f5661f1f566fade1b16cad7cd
https://github.com/PDAL/PDAL/commit/6f43b31f85a5b62f5661f1f566fade1b16cad7cd
Author: Howard Butler <howard at hobu.co>
Date: 2020-02-12 (Wed, 12 Feb 2020)
Changed paths:
M plugins/hdf/CMakeLists.txt
M plugins/hdf/io/HdfReader.cpp
M plugins/hdf/io/HdfReader.hpp
M plugins/hdf/test/HdfReadertest.cpp
M scripts/conda/osx.sh
A test/data/hdf/autzen.h5
Log Message:
-----------
add simple readers.hdf test based on autzen
Compare: https://github.com/PDAL/PDAL/compare/655403687383%5E...6f43b31f85a5
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