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<p>Hi <span lang="EN-US">Sean,</span></p>
<p><span lang="EN-US">Make sure you don't have dangling gdal
libraries around. Maybe after upgrading, you still have old GDAL
libraries.</span></p>
<p><span lang="EN-US">Can you confirm that you have only one GDAL
library?<br>
</span></p>
<p><span lang="EN-US">Best regards,</span></p>
<p><span lang="EN-US">Jorge<br>
</span></p>
<div class="moz-cite-prefix">On 05/02/25 12:32, Chater, ST, Mnr
[schater--- via postgis-users wrote:<br>
</div>
<blockquote type="cite" cite="mid:CT2P275MB0386E5CBD5F760318D56FF10F1F72@CT2P275MB0386.ZAFP275.PROD.OUTLOOK.COM">
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<p class="MsoNormal"><span lang="EN-US">Hi,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal">I am trying to ingest an out-DB raster into
PostgreSQL 15 database using the raster2pgsql command. I have
PostGIS 3.3.8 installed (recently upgraded from 3.2). This
server is running Rocky Linux (will refer to this as server
A). Please note this server is running a production
application so I would prefer not to have to uninstall
everything and restart from scratch.<o:p></o:p></p>
<p class="MsoNormal">This is the command I have used in the past
and have been using now:<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><b>/usr/pgsql-15/bin/raster2pgsql -d -s
4326 -t auto -R -F -Y -e
/home/<username>/Downloads/2016-01-01_40m_k30.tif
public.test_raster_table | psql -U <postgres-user> -d
<db-name><o:p></o:p></b></p>
<p class="MsoNormal"><b><o:p> </o:p></b></p>
<p class="MsoNormal">After upgrading to PostGIS 3.2 I have been
running into the following error when running my ingestion
command:<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><b>[user@host Downloads]$
/usr/pgsql-15/bin/raster2pgsql ....<o:p></o:p></b></p>
<p class="MsoNormal"><b>Processing 1/1:
/home/demsa/Downloads/2016-01-01_40m_k30.tif<o:p></o:p></b></p>
<p class="MsoNormal"><b>INFO: Using computed tile size: 256x256<o:p></o:p></b></p>
<p class="MsoNormal"><b>DROP TABLE<o:p></o:p></b></p>
<p class="MsoNormal"><b>CREATE TABLE<o:p></o:p></b></p>
<p class="MsoNormal"><b>COPY 50<o:p></o:p></b></p>
<p class="MsoNormal"><b>COPY 50<o:p></o:p></b></p>
<p class="MsoNormal"><b>COPY 50<o:p></o:p></b></p>
<p class="MsoNormal"><b>COPY 50<o:p></o:p></b></p>
<p class="MsoNormal"><b>COPY 50<o:p></o:p></b></p>
<p class="MsoNormal"><b>COPY 50<o:p></o:p></b></p>
<p class="MsoNormal"><b>COPY 50<o:p></o:p></b></p>
<p class="MsoNormal"><b>COPY 50<o:p></o:p></b></p>
<p class="MsoNormal"><b>COPY 50<o:p></o:p></b></p>
<p class="MsoNormal"><b>munmap_chunk(): invalid pointer<o:p></o:p></b></p>
<p class="MsoNormal"><b>ERROR: rt_band_from_wkb: Premature end
of WKB on band offline path reading<o:p></o:p></b></p>
<p class="MsoNormal"><b>CONTEXT: COPY backfill_table_mean, line
42, column rast:
"010000010043EEF8D9F5353A3F4075AD9570363ABF9A3CA74761E4334043AAD5064C5641C000000000000000000000000000..."<o:p></o:p></b></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal">I have successfully ingested out-DB rasters
to the same database in the past. In fact, the <i>2016-01-01_40m_k30.tif</i> in
the above command is one of the files that I have successfully
ingested into the same database in the past.<o:p></o:p></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><b><u><span lang="EN-US">Attemps to
resolve:<o:p></o:p></span></u></b></p>
<ul style="margin-top:0in" type="disc">
<li class="MsoNormal" style="mso-list:l0 level1 lfo1">I have
created a blank raster in QGIS (<i>test.tif</i>), which is
quite small (6x4 pixels) and attempted to ingest this with
the above command. The same error appears, which leads me to
believe there is something wrong with the install of
PostGIS/postgis_raster package that I have.<o:p></o:p></li>
<li class="MsoNormal" style="mso-list:l0 level1 lfo1">I copied
both rasters (<i>2016-01-01_40m_k30.tif</i> and <i>test.tif</i>)
across to another linux server (server B) which is has
PostGIS 3.3.4. Using this
command: /usr/pgsql-14/bin/raster2pgsql -d -s 4326 -t auto
-R -F -Y -e
/home/<username>/Downloads/2016-01-01_40m_k30.tif
public.test_raster_table | psql -p 5432 -U
<postgres-user> -d <dbname> -h <server A
IP> I was successfully able to ingest both rasters into
the database on server A.<o:p></o:p></li>
<ul style="margin-top:0in" type="disc">
<li class="MsoNormal" style="mso-list:l0 level2 lfo1">This
leads me to believe that there is something wrong with the
PostGIS version that I am using and not with the rasters
themselves.<o:p></o:p></li>
</ul>
<li class="MsoNormal" style="mso-list:l0 level1 lfo1">Tried
various combinations of the raster2pgsql flags<o:p></o:p></li>
</ul>
<table class="MsoNormalTable" border="0" cellspacing="0" cellpadding="0" style="border-collapse:collapse">
<tbody>
<tr>
<td width="312" valign="top" style="width:233.75pt;border:solid windowtext 1.0pt;padding:0in 5.4pt 0in 5.4pt">
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"inherit",serif;color:#0C0D0E">Removed </span><code><span style="font-size:10.0pt;font-family:"var(--ff-mono)",serif;color:#0C0D0E;border:none windowtext 1.0pt;padding:0in">-t
auto</span></code><span style="font-size:10.0pt;font-family:"inherit",serif;color:#0C0D0E"><o:p></o:p></span></p>
</td>
<td width="312" valign="top" style="width:233.75pt;border:solid windowtext 1.0pt;border-left:none;padding:0in 5.4pt 0in 5.4pt">
<p class="MsoNormal"><span lang="EN-US">free(): invalid
pointer<o:p></o:p></span></p>
</td>
</tr>
<tr>
<td width="312" valign="top" style="width:233.75pt;border:solid windowtext 1.0pt;border-top:none;padding:0in 5.4pt 0in 5.4pt">
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"inherit",serif;color:#0C0D0E">Removed </span><code><span style="font-size:10.0pt;font-family:"var(--ff-mono)",serif;color:#0C0D0E;border:none windowtext 1.0pt;padding:0in">-e</span></code><span style="font-size:10.0pt;font-family:"inherit",serif;color:#0C0D0E"><o:p></o:p></span></p>
</td>
<td width="312" valign="top" style="width:233.75pt;border-top:none;border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;padding:0in 5.4pt 0in 5.4pt">
<p class="MsoNormal">COPY 50<br>
COPY 50<br>
COPY 50<br>
free(): invalid pointer<br>
ERROR: rt_raster_from_hexwkb: Raster HEXWKB input must
have an even number of characters<br>
CONTEXT: COPY backfill_table_mean, line 42, column
rast:
"010000010043EEF8D9F5353A3F4075AD9570363ABF9A3CA74761E4334043AAD5064C5641C00000..."<span lang="EN-US"><o:p></o:p></span></p>
</td>
</tr>
<tr>
<td width="312" valign="top" style="width:233.75pt;border:solid windowtext 1.0pt;border-top:none;padding:0in 5.4pt 0in 5.4pt">
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"inherit",serif;color:#0C0D0E">Removed </span><code><span style="font-size:10.0pt;font-family:"var(--ff-mono)",serif;color:#0C0D0E;border:none windowtext 1.0pt;padding:0in">-Y</span></code><span style="font-size:10.0pt;font-family:"inherit",serif;color:#0C0D0E"><o:p></o:p></span></p>
</td>
<td width="312" valign="top" style="width:233.75pt;border-top:none;border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;padding:0in 5.4pt 0in 5.4pt">
<p class="MsoNormal"><span lang="EN-US">ERROR:
unterminated quoted string at or near
"'2016-01-01_40m_k30."<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">LINE 1:
...362D30312D30315F34306D5F6B33302E74696600'::raster,'2016-01-0...<o:p></o:p></span></p>
</td>
</tr>
<tr>
<td width="312" valign="top" style="width:233.75pt;border:solid windowtext 1.0pt;border-top:none;padding:0in 5.4pt 0in 5.4pt">
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"inherit",serif;color:#0C0D0E">Removed </span><code><span style="font-size:10.0pt;font-family:"var(--ff-mono)",serif;color:#0C0D0E;border:none windowtext 1.0pt;padding:0in">-R</span></code><span style="font-size:10.0pt;font-family:"inherit",serif;color:#0C0D0E"><o:p></o:p></span></p>
</td>
<td width="312" valign="top" style="width:233.75pt;border-top:none;border-left:none;border-bottom:solid windowtext 1.0pt;border-right:solid windowtext 1.0pt;padding:0in 5.4pt 0in 5.4pt">
<p class="MsoNormal">munmap_chunk(): invalid pointer<br>
ERROR: rt_band_from_wkb: Premature end of WKB on band
data reading (rt_<a class="moz-txt-link-freetext" href="wkb.c:201">wkb.c:201</a>)<br>
CONTEXT: COPY backfill_table_mean, line 49, column
rast:
"010000010043EEF8D9F5353A3F4075AD9570363ABF8835813D97FE3340FE80203F676341C000000000000000000000000000..."<span lang="EN-US"><o:p></o:p></span></p>
</td>
</tr>
</tbody>
</table>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><b><u>The results of running gdalinfo (on
separate windows PC) on both of the rasters I tried to
ingest:<o:p></o:p></u></b></p>
<p class="MsoNormal"><b><u><o:p><span style="text-decoration:none"> </span></o:p></u></b></p>
<p class="MsoNormal"><b>> gdalinfo 2016-01-01_40m_k30.tif<o:p></o:p></b></p>
<p class="MsoNormal">Driver: GTiff/GeoTIFF<o:p></o:p></p>
<p class="MsoNormal">Warning 1: PROJ: proj_create_from_database:
<a class="moz-txt-link-freetext" href="C:\Program">C:\Program</a>
Files\PostgreSQL\14\share\contrib\postgis-3.3\proj\proj.db
contains DATABASE.LAYOUT.VERSION.MINOR = 0 whereas a number
>= 2 is expected. It comes from another PROJ installation.<o:p></o:p></p>
<p class="MsoNormal">Files: 2016-01-01_40m_k30.tif<o:p></o:p></p>
<p class="MsoNormal">Size is 7265, 8338<o:p></o:p></p>
<p class="MsoNormal">Coordinate System is:<o:p></o:p></p>
<p class="MsoNormal">GEOGCRS["WGS 84",<o:p></o:p></p>
<p class="MsoNormal"> DATUM["World Geodetic System 1984",<o:p></o:p></p>
<p class="MsoNormal"> ELLIPSOID["WGS
84",6378137,298.257223563,<o:p></o:p></p>
<p class="MsoNormal"> LENGTHUNIT["metre",1,<o:p></o:p></p>
<p class="MsoNormal"> ID["EPSG",9001]]]],<o:p></o:p></p>
<p class="MsoNormal"> PRIMEM["Greenwich",0,<o:p></o:p></p>
<p class="MsoNormal">
ANGLEUNIT["degree",0.0174532925199433,<o:p></o:p></p>
<p class="MsoNormal"> ID["EPSG",9122]]],<o:p></o:p></p>
<p class="MsoNormal"> CS[ellipsoidal,2],<o:p></o:p></p>
<p class="MsoNormal"> AXIS["latitude",north,<o:p></o:p></p>
<p class="MsoNormal"> ORDER[1],<o:p></o:p></p>
<p class="MsoNormal">
ANGLEUNIT["degree",0.0174532925199433,<o:p></o:p></p>
<p class="MsoNormal"> ID["EPSG",9122]]],<o:p></o:p></p>
<p class="MsoNormal"> AXIS["longitude",east,<o:p></o:p></p>
<p class="MsoNormal"> ORDER[2],<o:p></o:p></p>
<p class="MsoNormal">
ANGLEUNIT["degree",0.0174532925199433,<o:p></o:p></p>
<p class="MsoNormal"> ID["EPSG",9122]]]]<o:p></o:p></p>
<p class="MsoNormal">Data axis to CRS axis mapping: 2,1<o:p></o:p></p>
<p class="MsoNormal">Origin =
(17.844391979228011,-31.500006410136233)<o:p></o:p></p>
<p class="MsoNormal">Pixel Size =
(0.000399944803551,-0.000399973379606)<o:p></o:p></p>
<p class="MsoNormal">Metadata:<o:p></o:p></p>
<p class="MsoNormal"> AREA_OR_POINT=Area<o:p></o:p></p>
<p class="MsoNormal"> TIFFTAG_SOFTWARE=GDAL 3.7.0e (3070046)
(4.5.1;1700;3.0.0;2.0.7;;;;), PROJ 9.2.1
(EPSG.VERSION=v10.088;EPSG.DATE=2023-05-13;ESRI.VERSION=ArcGIS
Pro 3.1;ESRI.DATE=2023-19-01;PROJ_DATA.VERSION=1.14;)<o:p></o:p></p>
<p class="MsoNormal">Image Structure Metadata:<o:p></o:p></p>
<p class="MsoNormal"> COMPRESSION=DEFLATE<o:p></o:p></p>
<p class="MsoNormal"> INTERLEAVE=BAND<o:p></o:p></p>
<p class="MsoNormal"> PREDICTOR=3<o:p></o:p></p>
<p class="MsoNormal">Corner Coordinates:<o:p></o:p></p>
<p class="MsoNormal">Upper Left ( 17.8443920, -31.5000064) (
17d50'39.81"E, 31d30' 0.02"S)<o:p></o:p></p>
<p class="MsoNormal">Lower Left ( 17.8443920, -34.8349844) (
17d50'39.81"E, 34d50' 5.94"S)<o:p></o:p></p>
<p class="MsoNormal">Upper Right ( 20.7499910, -31.5000064) (
20d44'59.97"E, 31d30' 0.02"S)<o:p></o:p></p>
<p class="MsoNormal">Lower Right ( 20.7499910, -34.8349844) (
20d44'59.97"E, 34d50' 5.94"S)<o:p></o:p></p>
<p class="MsoNormal">Center ( 19.2971915, -33.1674954) (
19d17'49.89"E, 33d10' 2.98"S)<o:p></o:p></p>
<p class="MsoNormal">Band 1 Block=256x256 Type=Float32,
ColorInterp=Gray<o:p></o:p></p>
<p class="MsoNormal"> Min=19.340 Max=27.754<o:p></o:p></p>
<p class="MsoNormal"> Minimum=19.340, Maximum=27.754,
Mean=24.930, StdDev=1.194<o:p></o:p></p>
<p class="MsoNormal"> NoData Value=-9999<o:p></o:p></p>
<p class="MsoNormal"> Metadata:<o:p></o:p></p>
<p class="MsoNormal"> STATISTICS_APPROXIMATE=YES<o:p></o:p></p>
<p class="MsoNormal"> STATISTICS_MAXIMUM=27.753507614136<o:p></o:p></p>
<p class="MsoNormal"> STATISTICS_MEAN=24.93024257498<o:p></o:p></p>
<p class="MsoNormal"> STATISTICS_MINIMUM=19.340391159058<o:p></o:p></p>
<p class="MsoNormal"> STATISTICS_STDDEV=1.1943478187917<o:p></o:p></p>
<p class="MsoNormal"> STATISTICS_VALID_PERCENT=73.14<o:p></o:p></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><b>> gdalinfo test_grid.tif<o:p></o:p></b></p>
<p class="MsoNormal">Driver: GTiff/GeoTIFF<o:p></o:p></p>
<p class="MsoNormal">Warning 1: PROJ: proj_create_from_database:
<a class="moz-txt-link-freetext" href="C:\Program">C:\Program</a>
Files\PostgreSQL\14\share\contrib\postgis-3.3\proj\proj.db
contains DATABASE.LAYOUT.VERSION.MINOR = 0 whereas a number
>= 2 is expected. It comes from another PROJ installation.<o:p></o:p></p>
<p class="MsoNormal">Files: test_grid.tif<o:p></o:p></p>
<p class="MsoNormal">Size is 6, 4<o:p></o:p></p>
<p class="MsoNormal">Coordinate System is:<o:p></o:p></p>
<p class="MsoNormal">GEOGCRS["WGS 84",<o:p></o:p></p>
<p class="MsoNormal"> DATUM["World Geodetic System 1984",<o:p></o:p></p>
<p class="MsoNormal"> ELLIPSOID["WGS
84",6378137,298.257223563,<o:p></o:p></p>
<p class="MsoNormal"> LENGTHUNIT["metre",1,<o:p></o:p></p>
<p class="MsoNormal"> ID["EPSG",9001]]]],<o:p></o:p></p>
<p class="MsoNormal"> PRIMEM["Greenwich",0,<o:p></o:p></p>
<p class="MsoNormal">
ANGLEUNIT["degree",0.0174532925199433,<o:p></o:p></p>
<p class="MsoNormal"> ID["EPSG",9122]]],<o:p></o:p></p>
<p class="MsoNormal"> CS[ellipsoidal,2],<o:p></o:p></p>
<p class="MsoNormal"> AXIS["latitude",north,<o:p></o:p></p>
<p class="MsoNormal"> ORDER[1],<o:p></o:p></p>
<p class="MsoNormal">
ANGLEUNIT["degree",0.0174532925199433,<o:p></o:p></p>
<p class="MsoNormal"> ID["EPSG",9122]]],<o:p></o:p></p>
<p class="MsoNormal"> AXIS["longitude",east,<o:p></o:p></p>
<p class="MsoNormal"> ORDER[2],<o:p></o:p></p>
<p class="MsoNormal">
ANGLEUNIT["degree",0.0174532925199433,<o:p></o:p></p>
<p class="MsoNormal"> ID["EPSG",9122]]]]<o:p></o:p></p>
<p class="MsoNormal">Data axis to CRS axis mapping: 2,1<o:p></o:p></p>
<p class="MsoNormal">Origin =
(16.639998682000002,-31.334238383999999)<o:p></o:p></p>
<p class="MsoNormal">Pixel Size =
(1.000000000000000,-1.000000000000001)<o:p></o:p></p>
<p class="MsoNormal">Metadata:<o:p></o:p></p>
<p class="MsoNormal"> AREA_OR_POINT=Area<o:p></o:p></p>
<p class="MsoNormal">Image Structure Metadata:<o:p></o:p></p>
<p class="MsoNormal"> INTERLEAVE=BAND<o:p></o:p></p>
<p class="MsoNormal">Corner Coordinates:<o:p></o:p></p>
<p class="MsoNormal">Upper Left ( 16.6399987, -31.3342384) (
16d38'24.00"E, 31d20' 3.26"S)<o:p></o:p></p>
<p class="MsoNormal">Lower Left ( 16.6399987, -35.3342384) (
16d38'24.00"E, 35d20' 3.26"S)<o:p></o:p></p>
<p class="MsoNormal">Upper Right ( 22.6399987, -31.3342384) (
22d38'24.00"E, 31d20' 3.26"S)<o:p></o:p></p>
<p class="MsoNormal">Lower Right ( 22.6399987, -35.3342384) (
22d38'24.00"E, 35d20' 3.26"S)<o:p></o:p></p>
<p class="MsoNormal">Center ( 19.6399987, -33.3342384) (
19d38'24.00"E, 33d20' 3.26"S)<o:p></o:p></p>
<p class="MsoNormal">Band 1 Block=6x4 Type=Float32,
ColorInterp=Gray<o:p></o:p></p>
<p class="MsoNormal"> NoData Value=0<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><b><u>The result of running sudo journalctl
--no-pager | tail -n 30 immediately
after raster2pgsql fails.<o:p></o:p></u></b></p>
<p class="MsoNormal">Feb 05 12:46:42 SUNGIS18 systemd[1]:
Started Process Core Dump (PID 265814/UID 0).<o:p></o:p></p>
<p class="MsoNormal">Feb 05 12:46:42 SUNGIS18
systemd-coredump[265815]: Resource limits disable core dumping
for process 265810 (raster2pgsql).<o:p></o:p></p>
<p class="MsoNormal">Feb 05 12:46:42 SUNGIS18
systemd-coredump[265815]: Process 265810 (raster2pgsql) of
user 1000 dumped core.<o:p></o:p></p>
<p class="MsoNormal">Feb 05 12:46:42 SUNGIS18 systemd[1]: <a href="mailto:systemd-coredump@133-265814-0.service" moz-do-not-send="true" class="moz-txt-link-freetext">
systemd-coredump@133-265814-0.service</a>: Deactivated
successfully.<o:p></o:p></p>
<p class="MsoNormal">Feb 05 12:46:42 SUNGIS18 systemd[1]:
Started Process Core Dump (PID 265819/UID 0).<o:p></o:p></p>
<p class="MsoNormal">Feb 05 12:46:42 SUNGIS18
systemd-coredump[265820]: Resource limits disable core dumping
for process 265813 (postmaster).<o:p></o:p></p>
<p class="MsoNormal">Feb 05 12:46:42 SUNGIS18
systemd-coredump[265820]: Process 265813 (postmaster) of user
26 dumped core.<o:p></o:p></p>
<p class="MsoNormal">Feb 05 12:46:42 SUNGIS18 systemd[1]: <a href="mailto:systemd-coredump@134-265819-0.service" moz-do-not-send="true" class="moz-txt-link-freetext">
systemd-coredump@134-265819-0.service</a>: Deactivated
successfully.<o:p></o:p></p>
<p class="MsoNormal">Feb 05 12:46:44 SUNGIS18 sudo[265831]:
demsa : TTY=pts/2 ; PWD=/home/demsa/Downloads ; USER=root ;
COMMAND=/bin/journalctl --no-pager<o:p></o:p></p>
<p class="MsoNormal">Feb 05 12:46:44 SUNGIS18 sudo[265831]:
pam_unix(<a class="moz-txt-link-freetext" href="sudo:session">sudo:session</a>): session opened for user root(uid=0) by
demsa(uid=1000)<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Any advice as to how I could investigate
this further or resolve the issue would be much appreciated.<o:p></o:p></p>
<p class="MsoNormal"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">Many thanks<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US">Sean Chater<o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
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