[gdal-dev] layer.GetSpatialRef() fails on linux for shapefiles

Javier Jimenez Shaw j1 at jimenezshaw.com
Thu Oct 12 01:10:49 PDT 2023


Are you running pycharm under the conda environment? If you lose any
setting while combining both it can be a problem.

Have you tried setting PROJ_DEBUG=3 ?
It will show some traces from PROJ, like the location of proj.db used. The
point is if you can see the std out.

On Wed, 11 Oct 2023, 15:18 Jonathan Moules via gdal-dev, <
gdal-dev at lists.osgeo.org> wrote:

> Hi List,
>
> So, after more investigation:
>
> * Using Python Anaconda on either Mac or Linux for GDAL (3.7.1),
> `GetSpatialRef` triggers a RunTime Error for all shapefiles (but only
> shapefiles).
>
> * This happens on Ubuntu (two machines), and a Mac, but only under PyCharm.
>
> * Using the exact same `conda` environment as triggers the above:
> running it directly from the terminal works fine.
>
> So there's something about the combination of conda and Pycharm that
> breaks this aspect of GDAL shapefile handling on *nix and Mac.
>
> Any thoughts? Also, who do I actually report this bug to? Is it GDAL,
> Conda, Pycharm, something else?
>
> Cheers,
>
> Jonathan
>
>
> On 2023-09-28 14:58, Jonathan Moules via gdal-dev wrote:
> > Well, it seems that PROJ_DATA isn't set in their environment. But it's
> > not set in mine either (`print(os.environ['PROJ_DATA']`)! So no idea
> > why mine works just fine without it (Windows 11 thing?).
> >
> > Creating a PROJ_DATA env var didn't fix anything. Even adding it
> > explicitly in Python.
> >
> > Their log file does have this in at a WARNING level:
> >
> > `PROJ: proj_create_from_database: Open of
> > /home/user/anaconda3/envs/env1/share/proj failed`
> >
> > That path has: `drwxrwxr-x` permissions.
> >
> > To answer Even's earlier question:
> >
> > `ogrinfo /path/to/shape.shp` works fine on their system.
> >
> >
> >
> > On 2023-09-28 12:37, Rahkonen Jukka wrote:
> >> Hi,
> >>
> >> Then they should add that environment if they do not know that they
> >> do not belong to "most users"
> >> https://proj.org/en/9.3/usage/environmentvars.html
> >>
> >> -Jukka Rahkonen-
> >>
> >> -----Alkuperäinen viesti-----
> >> Lähettäjä: gdal-dev <gdal-dev-bounces at lists.osgeo.org> Puolesta
> >> Jonathan Moules via gdal-dev
> >> Lähetetty: torstai 28. syyskuuta 2023 14.10
> >> Vastaanottaja: gdal-dev at lists.osgeo.org; Even Rouault
> >> <even.rouault at spatialys.com>
> >> Aihe: Re: [gdal-dev] layer.GetSpatialRef() fails on linux for shapefiles
> >>
> >> Hi Even,
> >>
> >> The colleague doesn't have either a PROJ_LIB or a PROJ_DATA
> >> environment variable.
> >>
> >> I asked another colleague to try it; they're on Ubuntu 20.04, and it
> >> worked for them. I believe using the same setup instructions.
> >>
> >> Cheers,
> >>
> >> Jonathan
> >>
> >> On 2023-09-24 22:37, Jonathan Moules via gdal-dev wrote:
> >>> Thanks Even. I don't have access to the machine either as the
> >>> colleague is moving to another project. I'll have to see if it fails
> >>> for another *nix user.
> >>>
> >>> On 2023-09-24 22:35, Even Rouault wrote:
> >>>> Le 24/09/2023 à 23:22, Jonathan Moules via gdal-dev a écrit :
> >>>>>> Also check if the environment isn't messed up regarding PROJ and
> >>>>> the PROJ_LIB/PROJ_DATA environment variable
> >>>>>
> >>>>> Thanks Even; sorry, what does this line mean? I'm guessing you're
> >>>>> referring to:
> >>>>> https://proj.org/en/9.3/usage/environmentvars.html - what would a
> >>>>> "messed up" one look like?
> >>>>>
> >>>> Hard to say without access to the machine. Perhaps just try to
> >>>> recreate a new Conda env from scratch
> >>>>
> >>>>
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