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    I know I am late to the party, but I ran into the same thing today
    (Building Proj 6, GDAL 3 on Debian Stretch).  I got around it by
    setting LDFLAGS before running ./configure so the linker finds the
    proj 6 install first.  Without setting LDFLAGS, ./configure would
    find the new proj, but libtool would try to link to the system one
    (by full path no less, not just -lproj).<br>
    <br>
    So assuming proj 6 (and GDAL) is installed in $INSTALL_DIR:<br>
    <br>
    export LDFLAGS="-L${INSTALL_DIR}/lib -Wl,-rpath,${INSTALL_DIR}/lib"<br>
    ./configure \<br>
                    --prefix="${INSTALL_DIR}" \<br>
                    --with-proj="${INSTALL_DIR}" <br>
    <br>
    I'm not sure if it matters, but I also set
    CMAKE_INSTALL_RPATH=$INSTALL_DIR when I build proj.<br>
    <p><br>
    </p>
    <div class="moz-cite-prefix">On 5/8/19 6:54 PM, Simon Eves wrote:<br>
    </div>
    <blockquote type="cite"
cite="mid:CAJf0KTQqcEavuCm3CQJUsK5bq=ZZf3BUkboOBwnKj=kUxrA_iA@mail.gmail.com">
      <meta http-equiv="content-type" content="text/html; charset=UTF-8">
      <div dir="ltr">I removed the system libgdal-dev and proj-bin, and
        then this sequence worked, with ldd showing the local proj, and
        the apps all compile.
        <div><br>
        </div>
        <div>Still convinced I'm doing something stupid and n00b, but
          what? Why didn't the local proj DSO take priority before?</div>
      </div>
      <br>
      <div class="gmail_quote">
        <div dir="ltr" class="gmail_attr">On Wed, May 8, 2019 at 9:29 AM
          Simon Eves <<a href="mailto:simon.eves@omnisci.com"
            moz-do-not-send="true">simon.eves@omnisci.com</a>> wrote:<br>
        </div>
        <blockquote class="gmail_quote" style="margin:0px 0px 0px
          0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
          <div dir="ltr">
            <div dir="ltr">
              <div>$ ls -l /home/simon.eves/scratch/gdal3/install/lib/</div>
              <div>total 107536</div>
              <div>-rw-r--r-- 1 simon.eves mapd 79490260 May  8 09:06
                libproj.a</div>
              <div>-rwxr-xr-x 1 simon.eves mapd      998 May  8 09:06 <a
                  href="http://libproj.la" target="_blank"
                  moz-do-not-send="true">libproj.la</a></div>
              <div>lrwxrwxrwx 1 simon.eves mapd       17 May  8 09:06
                libproj.so -> libproj.so.15.0.0</div>
              <div>lrwxrwxrwx 1 simon.eves mapd       17 May  8 09:06
                libproj.so.15 -> libproj.so.15.0.0</div>
              <div>-rwxr-xr-x 1 simon.eves mapd 30610584 May  8 09:06
                libproj.so.15.0.0</div>
              <div>drwxr-xr-x 2 simon.eves mapd     4096 May  8 09:06
                pkgconfig</div>
              <div><br>
              </div>
            </div>
          </div>
          <br>
          <div class="gmail_quote">
            <div dir="ltr" class="gmail_attr">On Wed, May 8, 2019 at
              9:25 AM Simon Eves <<a
                href="mailto:simon.eves@omnisci.com" target="_blank"
                moz-do-not-send="true">simon.eves@omnisci.com</a>>
              wrote:<br>
            </div>
            <blockquote class="gmail_quote" style="margin:0px 0px 0px
              0.8ex;border-left:1px solid
              rgb(204,204,204);padding-left:1ex">
              <div dir="ltr">
                <div dir="ltr">
                  <div dir="ltr">
                    <div dir="ltr">
                      <div dir="ltr">
                        <div>No, it shows
                          /usr/lib/x86_64-linux-gnu/libproj.sso.12 (the
                          system-installed Proj 5.2.0)</div>
                        <div><br>
                        </div>
                        <div>I just did it all again from scratch...<br>
                        </div>
                        <div><br>
                        </div>
                        <div>
                          <div>$ echo $LD_LIBRARY_PATH <br>
                          </div>
                          <div>
                            <div>/home/simon.eves/scratch/gdal3/install/lib:/usr/local/mapd-deps/lib64:/usr/local/mapd-deps/lib:/usr/local/cuda/lib64</div>
                          </div>
                          <div>$ cd /home/simon.eves/scratch/gdal3/<br>
                          </div>
                          <div>$ rm -rf gdal-3.0.0 proj-6.0.0 install/*<br>
                          </div>
                          <div>$ tar xzvf proj-6.0.0.tar.gz <br>
                          </div>
                          <div>$ cd proj-6.0.0/</div>
                          <div>$ ./configure
                            --prefix=/home/simon.eves/scratch/gdal3/install</div>
                          <div>$ make -j12</div>
                          <div>[completes]</div>
                          <div>$ make install</div>
                          <div>[completes]</div>
                          <div>$ cd ..<br>
                          </div>
                          <div>$ tar xvf gdal-3.0.0rc2.tar <br>
                          </div>
                          <div>$ cd gdal-3.0.0/</div>
                          <div>$ ./configure
                            --prefix=/home/simon.eves/scratch/gdal3/install
                            --without-geos
                            --with-kml=/usr/local/mapd-deps
                            --with-proj=/home/simon.eves/scratch/gdal3/install</div>
                          <div>[completes, shows Proj >= 6.0 yes]</div>
                          <div>$ make -j12</div>
                        </div>
                        <div>[fails in first app as before]</div>
                        <div>
                          <div>$ ldd .libs/libgdal.so | grep proj</div>
                          <div>libproj.so.12 =>
                            /usr/lib/x86_64-linux-gnu/libproj.so.12
                            (0x00007f3d98cb3000)</div>
                        </div>
                        <div><br>
                        </div>
                        <div>What am I doing wrong, such that the
                          combination of $LD_LIBRARY_PATH priority and
                          --with-proj still isn't making GDAL see the
                          local Proj before the system one?</div>
                        <div><br>
                        </div>
                        <div>Simon</div>
                      </div>
                    </div>
                  </div>
                </div>
              </div>
              <br>
              <div class="gmail_quote">
                <div dir="ltr" class="gmail_attr">On Wed, May 8, 2019 at
                  12:41 AM Even Rouault <<a
                    href="mailto:even.rouault@spatialys.com"
                    target="_blank" moz-do-not-send="true">even.rouault@spatialys.com</a>>
                  wrote:<br>
                </div>
                <blockquote class="gmail_quote" style="margin:0px 0px
                  0px 0.8ex;border-left:1px solid
                  rgb(204,204,204);padding-left:1ex">On mardi 7 mai 2019
                  16:42:41 CEST Simon Eves wrote:<br>
                  > That's what I have, even if that's not what I
                  wrote.<br>
                  > <br>
                  > <a class="moz-txt-link-abbreviated" href="mailto:simon.eves@football:~/scratch/gdal3/gdal-3.0.0$">simon.eves@football:~/scratch/gdal3/gdal-3.0.0$</a>
                  echo $LD_LIBRARY_PATH<br>
                  >
/home/simon.eves/scratch/gdal3/install/lib:/usr/local/mapd-deps/lib64:/usr/l<br>
                  > ocal/mapd-deps/lib:/usr/local/cuda/lib64:<br>
                  > <a class="moz-txt-link-abbreviated" href="mailto:simon.eves@football:~/scratch/gdal3/gdal-3.0.0$">simon.eves@football:~/scratch/gdal3/gdal-3.0.0$</a>
                  ./configure --without-geos<br>
                  > --with-libkml=/usr/local/mapd-deps<br>
                  >
                  --with-proj=/home/simon.eves/scratch/gdal3/install<br>
                  > ...<br>
                  > <a class="moz-txt-link-abbreviated" href="mailto:simon.eves@football:~/scratch/gdal3/gdal-3.0.0$">simon.eves@football:~/scratch/gdal3/gdal-3.0.0$</a>
                  make<br>
                  > ...<br>
                  > (cd apps; make)<br>
                  > make[1]: Entering directory
                  '/home/simon.eves/scratch/gdal3/gdal-3.0.0/apps'<br>
                  > /bin/bash
                  /home/simon.eves/scratch/gdal3/gdal-3.0.0/libtool
                  --mode=link<br>
                  > --silent g++  gdalinfo_bin.lo 
                  /home/simon.eves/scratch/gdal3/gdal-3.0.0/<br>
                  > <a href="http://libgdal.la" rel="noreferrer"
                    target="_blank" moz-do-not-send="true">libgdal.la</a> 
                  -o gdalinfo<br>
                  >
                  /home/simon.eves/scratch/gdal3/gdal-3.0.0/.libs/libgdal.so:
                  undefined<br>
                  > reference to `proj_alter_name'<br>
                  > [etc.]<br>
                  <br>
                  Look at the output of<br>
                  <br>
                  ldd
                  /home/simon.eves/scratch/gdal3/gdal-3.0.0/.libs/libgdal.so
                  | grep proj<br>
                  <br>
                  It should normally point to the libproj.so.15 of<br>
                  /home/simon.eves/scratch/gdal3/install/lib<br>
                  <br>
                  -- <br>
                  Spatialys - Geospatial professional services<br>
                  <a href="http://www.spatialys.com" rel="noreferrer"
                    target="_blank" moz-do-not-send="true">http://www.spatialys.com</a><br>
                </blockquote>
              </div>
              <br clear="all">
              <div><br>
              </div>
              -- <br>
              <div dir="ltr"
class="gmail-m_4214021502878222289gmail-m_5498066297828420502gmail_signature">
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                                                          Eves</font></span></span></td>
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style="white-space:nowrap;color:rgb(0,0,1)"><font size="2" face="arial,
                                                          helvetica,
                                                          sans-serif">Email: <a
href="mailto:simon.eves@omnisci.com" target="_blank"
                                                          moz-do-not-send="true">simon.eves@omnisci.com</a> |
                                                          Cell: </font></span></td>
                                                          <td
                                                          style="padding:0px;vertical-align:top"
                                                          align="left"><span
style="white-space:nowrap;color:rgb(0,0,1)"><font size="2" face="arial,
                                                          helvetica,
                                                          sans-serif">415.902.1996</font></span></td>
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            </blockquote>
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          <div><br>
          </div>
          -- <br>
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                                                          style="vertical-align:top"
                                                          align="left"><span
style="white-space:nowrap;color:rgb(0,0,1)"><font size="2" face="arial,
                                                          helvetica,
                                                          sans-serif">Senior
                                                          Graphics
                                                          Engineer,
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                                                          Group<br>
                                                          OmniSci, 1
                                                          Front St.
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                                                          Francisco, CA
                                                          94111, USA<br>
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                                                          style="padding:0px;vertical-align:top"
                                                          align="left"><span
style="white-space:nowrap;color:rgb(0,0,1)"><font size="2" face="arial,
                                                          helvetica,
                                                          sans-serif">Email: <a
href="mailto:simon.eves@omnisci.com" target="_blank"
                                                          moz-do-not-send="true">simon.eves@omnisci.com</a> |
                                                          Cell: </font></span></td>
                                                          <td
                                                          style="padding:0px;vertical-align:top"
                                                          align="left"><span
style="white-space:nowrap;color:rgb(0,0,1)"><font size="2" face="arial,
                                                          helvetica,
                                                          sans-serif">415.902.1996</font></span></td>
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                              </font></span></div>
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          </div>
        </blockquote>
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      <div><br>
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      -- <br>
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                                                <table
                                                  style="font-family:Times;width:2544px"
                                                  cellspacing="0"
                                                  cellpadding="0"
                                                  border="0">
                                                  <tbody>
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                                                      <td
                                                        style="vertical-align:top;font-size:0px"
                                                        align="left">
                                                        <table
                                                          cellspacing="0"
cellpadding="0" border="0">
                                                          <tbody>
                                                          <tr>
                                                          <td
                                                          style="padding:0px
                                                          15px 0px
                                                          0px;vertical-align:middle"
                                                          align="left"><font
                                                          size="2"
                                                          face="arial,
                                                          helvetica,
                                                          sans-serif"><a
href="http://www.omnisci.com/" target="_blank" moz-do-not-send="true"><img
src="http://www2.omnisci.com/l/298412/2018-09-18/3sqpg/298412/61753/OmniSci_Email_Header2.png"
moz-do-not-send="true"></a><br>
                                                          </font></td>
                                                          <td
                                                          style="padding:0px
                                                          0px 0px
                                                          15px;vertical-align:top"
                                                          align="left">
                                                          <table
                                                          style="width:215px"
cellspacing="0" cellpadding="0" border="0">
                                                          <tbody>
                                                          <tr>
                                                          <td
                                                          style="vertical-align:top"
                                                          align="left"><span
style="white-space:nowrap;color:rgb(0,0,1)"><span
                                                          style="color:rgb(14,76,144);font-weight:700"><font
                                                          size="2"
                                                          face="arial,
                                                          helvetica,
                                                          sans-serif">Simon
                                                          Eves</font></span></span></td>
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                                                          style="vertical-align:top"
                                                          align="left">
                                                          <table
                                                          cellspacing="0"
cellpadding="0" border="0">
                                                          <tbody>
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                                                          <td
                                                          style="vertical-align:top"
                                                          align="left"><span
style="white-space:nowrap;color:rgb(0,0,1)"><font size="2" face="arial,
                                                          helvetica,
                                                          sans-serif">Senior
                                                          Graphics
                                                          Engineer,
                                                          Rendering
                                                          Group<br>
                                                          OmniSci, 1
                                                          Front St.
                                                          #2650, San
                                                          Francisco, CA
                                                          94111, USA<br>
                                                          </font></span></td>
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                                                          style="vertical-align:top"
                                                          align="left">
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                                                          cellspacing="0"
cellpadding="0" border="0">
                                                          <tbody>
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                                                          <td
                                                          style="padding:0px;vertical-align:top"
                                                          align="left"><br>
                                                          </td>
                                                          <td
                                                          style="padding:0px;vertical-align:top"
                                                          align="left"><br>
                                                          </td>
                                                          </tr>
                                                          <tr>
                                                          <td
                                                          style="padding:0px;vertical-align:top"
                                                          align="left"><span
style="white-space:nowrap;color:rgb(0,0,1)"><font size="2" face="arial,
                                                          helvetica,
                                                          sans-serif">Email: <a
href="mailto:simon.eves@omnisci.com" target="_blank"
                                                          moz-do-not-send="true">simon.eves@omnisci.com</a> |
                                                          Cell: </font></span></td>
                                                          <td
                                                          style="padding:0px;vertical-align:top"
                                                          align="left"><span
style="white-space:nowrap;color:rgb(0,0,1)"><font size="2" face="arial,
                                                          helvetica,
                                                          sans-serif">415.902.1996</font></span></td>
                                                          </tr>
                                                          </tbody>
                                                          </table>
                                                          <br>
                                                          </td>
                                                          </tr>
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                                                <br>
                                              </div>
                                            </div>
                                          </div>
                                        </div>
                                      </div>
                                    </div>
                                  </div>
                                </div>
                              </div>
                            </div>
                          </font></span></div>
                    </div>
                  </div>
                </div>
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      </div>
      <br>
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      <pre class="moz-quote-pre" wrap="">_______________________________________________
gdal-dev mailing list
<a class="moz-txt-link-abbreviated" href="mailto:gdal-dev@lists.osgeo.org">gdal-dev@lists.osgeo.org</a>
<a class="moz-txt-link-freetext" href="https://lists.osgeo.org/mailman/listinfo/gdal-dev">https://lists.osgeo.org/mailman/listinfo/gdal-dev</a></pre>
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