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<p class="MsoNormal"><span style="mso-fareast-language:EN-US">Hi,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US">And when you .dump
<a href="https://www.sqlitetutorial.net/sqlite-dump/">https://www.sqlitetutorial.net/sqlite-dump/</a> the damaged table into a text file, do you only get 78 insert entries into it?<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US">-Jukka-<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="mso-fareast-language:EN-US"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b>Lähettäjä:</b> Isabel Kiefer <isabel@opengis.ch> <br>
<b>Lähetetty:</b> maanantai 14. helmikuuta 2022 12.53<br>
<b>Vastaanottaja:</b> Rahkonen Jukka (MML) <jukka.rahkonen@maanmittauslaitos.fi><br>
<b>Kopio:</b> gdal-dev@lists.osgeo.org<br>
<b>Aihe:</b> Re: [gdal-dev] Corrupted geopackage<o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">Thanks for your suggestion, Jukka! I tried all the advice from stackoverflow. I can do ".recover", but get only the features that have been visible all along. <o:p></o:p></p>
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<p class="MsoNormal">In the original .gpkg, I cannot DROP the affected RTree-Index. It gives me the same disk malformed error. But that would also have been my initial idea... <o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">On Mon, Feb 14, 2022 at 9:26 AM Rahkonen Jukka (MML) <<a href="mailto:jukka.rahkonen@maanmittauslaitos.fi">jukka.rahkonen@maanmittauslaitos.fi</a>> wrote:<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Hi,<o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span lang="EN-US">Without being able to see your database it is hard to give more advice that
<a href="https://stackoverflow.com/questions/18259692/how-to-recover-a-corrupt-sqlite3-database/18260642" target="_blank">
https://stackoverflow.com/questions/18259692/how-to-recover-a-corrupt-sqlite3-database/18260642</a> gives. Did you try all of them? Because the problem has something to do with the spatial index I would have a try be dropping it and repeating the suggested
tricks.</span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span lang="EN-US"> </span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span lang="EN-US">-Jukka Rahkonen-</span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span lang="EN-US"> </span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><b>Lähettäjä:</b> gdal-dev <<a href="mailto:gdal-dev-bounces@lists.osgeo.org" target="_blank">gdal-dev-bounces@lists.osgeo.org</a>>
<b>Puolesta </b>Isabel Kiefer<br>
<b>Lähetetty:</b> maanantai 14. helmikuuta 2022 10.17<br>
<b>Vastaanottaja:</b> <a href="mailto:gdal-dev@lists.osgeo.org" target="_blank">gdal-dev@lists.osgeo.org</a><br>
<b>Aihe:</b> [gdal-dev] Corrupted geopackage<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Hi everyone,<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">I've a problem with a corrupted geopackage. <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">It should contain a table with 694 entries, but only 78 are visible when opening the file with DB Browser for SQLite or QGIS. The table gpkg_ogr_contents says 694 though. When opening
the .gpkg with a Notepad or similar, I can see that there are more than 78 entries.<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">The error message in DB Browser is "database disk image is malformed in "PRAGMA "main".TABLE_INFO("rtree_XXX");" So it seems that there is a problem with the index of the concerned
table.<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Does anyone know how to fix this? I tried
<a href="https://stackoverflow.com/questions/18259692/how-to-recover-a-corrupt-sqlite3-database/18260642" target="_blank">
<span style="font-size:10.5pt;font-family:Roboto">https://stackoverflow.com/questions/18259692/how-to-recover-a-corrupt-sqlite3-database/18260642</span></a> but without success.<br clear="all">
<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Thanks in advance for your help!<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Isabel<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">--
<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-family:"Arial",sans-serif">Isabel Kiefer</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-family:"Arial",sans-serif">OPENGIS.ch</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:7.5pt;font-family:"Arial",sans-serif"><a href="mailto:isabel@opengis.ch" target="_blank">isabel@opengis.ch</a></span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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