[GRASS-SVN] r58863 - in grass/trunk/raster/r.li: . r.li.cwed r.li.daemon r.li.dominance r.li.edgedensity r.li.mpa r.li.mps r.li.padcv r.li.padrange r.li.padsd r.li.patchdensity r.li.patchnum r.li.pielou r.li.renyi r.li.richness r.li.setup r.li.shannon r.li.shape r.li.simpson
svn_grass at osgeo.org
svn_grass at osgeo.org
Mon Feb 3 13:48:32 PST 2014
Author: neteler
Date: 2014-02-03 13:48:32 -0800 (Mon, 03 Feb 2014)
New Revision: 58863
Modified:
grass/trunk/raster/r.li/r.li.cwed/r.li.cwed.html
grass/trunk/raster/r.li/r.li.daemon/r.li.daemon.html
grass/trunk/raster/r.li/r.li.dominance/r.li.dominance.html
grass/trunk/raster/r.li/r.li.edgedensity/r.li.edgedensity.html
grass/trunk/raster/r.li/r.li.html
grass/trunk/raster/r.li/r.li.mpa/r.li.mpa.html
grass/trunk/raster/r.li/r.li.mps/r.li.mps.html
grass/trunk/raster/r.li/r.li.padcv/r.li.padcv.html
grass/trunk/raster/r.li/r.li.padrange/r.li.padrange.html
grass/trunk/raster/r.li/r.li.padsd/r.li.padsd.html
grass/trunk/raster/r.li/r.li.patchdensity/r.li.patchdensity.html
grass/trunk/raster/r.li/r.li.patchnum/r.li.patchnum.html
grass/trunk/raster/r.li/r.li.pielou/r.li.pielou.html
grass/trunk/raster/r.li/r.li.renyi/r.li.renyi.html
grass/trunk/raster/r.li/r.li.richness/r.li.richness.html
grass/trunk/raster/r.li/r.li.setup/r.li.setup.html
grass/trunk/raster/r.li/r.li.shannon/r.li.shannon.html
grass/trunk/raster/r.li/r.li.shape/r.li.shape.html
grass/trunk/raster/r.li/r.li.simpson/r.li.simpson.html
Log:
r.li.* manuals: content standardization, HTML cosmetics
Modified: grass/trunk/raster/r.li/r.li.cwed/r.li.cwed.html
===================================================================
--- grass/trunk/raster/r.li/r.li.cwed/r.li.cwed.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.cwed/r.li.cwed.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -17,6 +17,26 @@
consider in the calculation. Each row must to have this syntax:<br>
<small>patchType1,patchType2,dissimilarityBetweenPatchType1andPatchType2</small><br>
+
+<h2>NOTES</h2>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+<br>
+If the raster is full of null value it is considered to have 0 patch and CWED=0.
+If Area is 0 r.li.cwed returns -1. This is possible
+only if the map is masked.<br>
+If you want to have null values instead run <br>
+<div class="code"><pre>
+r.null setnull=-1 input=my_map
+</pre></div>
+after index calculation.<br>
+<br>
+
+
<h2>EXAMPLES</h2>
To calculate mean pixel attribute index on map my_map, using
my_conf configuration file and saving results in
@@ -31,21 +51,6 @@
56,12,0.54<br>
23,66,0.99<br>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder.
-<br>
-If the raster is full of null value it is considered to have 0 patch and CWED=0.
-If Area is 0 r.li.cwed returns -1. This is possible
-only if the map is masked.<br>
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=-1 map=my_map
-</pre></div>
-after index calculation.<br>
-<br>
-
<h2>REFERENCES</h2>
McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
analysis program for quantifying landscape structure. USDA For. Serv.
@@ -53,13 +58,14 @@
<h2>SEE ALSO</h2>
-<em><a href="r.li.html">r.li</A></em> package overview <br>
-<em><a href="r.li.daemon.html">r.li.daemon</A></em><br>
-<em><a href="r.li.setup.html">r.li.setup</A></em>
+<em><a href="r.li.html">r.li</a></em> package overview <br>
+<em><a href="r.li.daemon.html">r.li.daemon</a></em><br>
+<em><a href="r.li.setup.html">r.li.setup</a></em>
<h2>AUTHORS</h2>
Serena Pallecchi student of Computer Science University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI), Italy (www.faunalia.it)
-<p><i>Last changed: $Date$</i>
+<p>
+<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.daemon/r.li.daemon.html
===================================================================
--- grass/trunk/raster/r.li/r.li.daemon/r.li.daemon.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.daemon/r.li.daemon.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -10,6 +10,7 @@
<img src="grass_logo.png" alt="GRASS logo"><hr align=center size=6 noshade>
<h2>NAME</h2>
+
<em><b>libgrass_rli</b></em> - r.li landscape index support library
<h2>DESCRIPTION</h2>
@@ -57,6 +58,7 @@
Compile it using a changed Makefile based on the file for <em>r.li.patchdensity</em>.
<h2>NOTES</h2>
+
Using GRASS library function to access raster rows can slow down moving windows
execution. It is recommended to use
<br><div class="code"><pre>
@@ -69,12 +71,19 @@
<h2>SEE ALSO</h2>
-<em><a href="http://grass.osgeo.org/gdp/landscape/r_le_manual5.pdf">old r.le manual</A></em><br>
-<em><a href="r.li.html">r.li</A></em> package overview <br>
-<em><a href="r.li.patchdensity.html">r.li.patchdensity</A></em>,
-<em><a href="r.li.setup.html">r.li.setup</A></em>
+<em><a href="http://grass.osgeo.org/gdp/landscape/r_le_manual5.pdf">old r.le manual</a></em><br>
+<em><a href="r.li.html">r.li</a></em> package overview <br>
+<em><a href="r.li.patchdensity.html">r.li.patchdensity</a></em>,
+<em><a href="r.li.setup.html">r.li.setup</a></em>
+
+<h2>REFERENCES</h2>
+McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
+analysis program for quantifying landscape structure. USDA For. Serv.
+Gen. Tech. Rep. PNW-351. (<a href="http://treesearch.fs.fed.us/pubs/3064">PDF</a>)
+
<h2>AUTHORS</h2>
+
Claudio Porta and Lucio Davide Spano, students of Computer Science
University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI)<br>
Modified: grass/trunk/raster/r.li/r.li.dominance/r.li.dominance.html
===================================================================
--- grass/trunk/raster/r.li/r.li.dominance/r.li.dominance.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.dominance/r.li.dominance.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -9,6 +9,20 @@
<li><b>p<small><small>i</small></small></b>: proportion of the landscape occupied by patch type i<br></li>
</ul>
+<h2>NOTES</h2>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+If input raster is full of null values r.li.dominance returns -1.<br>
+If you want to have null values instead run <br>
+<div class="code"><pre>
+r.null setnull=-1 input=my_map
+</pre></div>
+after index calculation.
+
<h2>EXAMPLES</h2>
To calculate dominance's diversity index on map my_map, using
my_conf configuration file and saving results in my_out file run:<br>
@@ -16,18 +30,11 @@
r.li.dominance input=my_map conf=my_conf output=my_out
</pre></div>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder. <br>
+<h2>REFERENCES</h2>
+McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
+analysis program for quantifying landscape structure. USDA For. Serv.
+Gen. Tech. Rep. PNW-351. (<a href="http://treesearch.fs.fed.us/pubs/3064">PDF</a>)
-If input raster is full of null values r.li.dominance returns -1.<br>
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=-1 map=my_map
-</pre></div>
-after index calculation.
-
<h2>SEE ALSO</h2>
<em>
<a href="r.li.html">r.li</a>
Modified: grass/trunk/raster/r.li/r.li.edgedensity/r.li.edgedensity.html
===================================================================
--- grass/trunk/raster/r.li/r.li.edgedensity/r.li.edgedensity.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.edgedensity/r.li.edgedensity.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -17,11 +17,23 @@
<li> <b>Area</b>: total landscape area<br>
</ul>
-<h2>REFERENCES</h2>
-McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
-analysis program for quantifying landscape structure. USDA For. Serv.
-Gen. Tech. Rep. PNW-351.
+<h2>NOTES</h2>
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+If input raster is full of null values <em>r.li.edgedensity</em> consider to have 0
+patch.<br>
+If area is 0 <em>r.li.edgedensity</em> returns -1; this is possible only if input
+raster is masked.
+If you want to have null values instead run <br>
+<div class="code"><pre>
+r.null setnull=-1 input=my_map
+</pre></div>
+after index calculation.
+
<h2>EXAMPLES</h2>
To calculate edge density index on map my_map, using
my_conf configuration file and saving results in
@@ -37,29 +49,20 @@
r.li.edgedensity input=my_map conf=my_conf output=my_out patch_type=34
</pre></div>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder.
-<br>
-If input raster is full of null values r.li.edgedensity consider to have 0
-patch.<br>
-If area is 0 r.li.edgedensity returns -1; this is possible only if input
-raster is masked.
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=-1 map=my_map
-</pre></div>
-after index calculation.
-
<h2>SEE ALSO</h2>
<em>
<a href="r.li.html">r.li</a>
</em>
+<h2>REFERENCES</h2>
+McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
+analysis program for quantifying landscape structure. USDA For. Serv.
+Gen. Tech. Rep. PNW-351.
+
<h2>AUTHORS</h2>
Serena Pallecchi student of Computer Science University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI), Italy (www.faunalia.it)
-<p><i>Last changed: $Date$</i>
+<p>
+<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.html
===================================================================
--- grass/trunk/raster/r.li/r.li.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -9,65 +9,60 @@
<img src="grass_logo.png" alt="GRASS logo"><hr align=center size=6 noshade>
-
<h2>NAME</h2>
<em><b>r.li</b></em> - Landscape structure analysis package overview.
-
<h2>KEYWORDS</h2>
-raster, landscape structure analysis, landscape metrics, landscape pattern, landscape analysis
+raster, landscape structure analysis, overview, landscape metrics, landscape pattern, landscape analysis
+
<h2>DESCRIPTION</h2>
-The <em>r.li</em> suite is a toolset for multiscale analysis of landscape
-structure. It aims at replacing the <em>r.le</em> suite of modules
-through a client-server, multiprocess implementation. External software
-for quantitative measures of landscape structure is for example FRAGSTATS
-(McGarigal and Marks 1995).
+The <em>r.li</em> suite is a toolset for multiscale analysis of landscape structure.
+It aims at replacing the <em>r.le</em> suite of modules through a client-server,
+multiprocess implementation. External software for quantitative measures of landscape
+structure is for example FRAGSTATS (McGarigal and Marks 1995).
<p>
-The <em>r.li</em> suite offers a set of patch and diversity indices. It
-supports analysis of landscapes composed of a mosaic of patches, but,
-more generally, the modules work with any two-dimensional raster map
-whose cell values are integer (e.g., 1, 2) or floating point (e.g., 1.1,
-3.2) values. The <em>r.li.setup</em> module has options for controlling
-the shape, size, number, and distribution of sampling areas used to
-collect information about the landscape structure. Sampling area shapes
-can be the entire map or a moving window of square, rectangular or with
-circular shape. The size of sampling areas can be changed, so that the
-landscape can be analyzed at a variety of spatial scales simultaneously.
-Sampling areas may be distributed across the landscape in a random,
-systematic, or stratified-random manner, or as a moving window.
+The <em>r.li</em> suite offers a set of patch and diversity indices.
+It supports analysis of landscapes composed of a mosaic of
+patches, but, more generally, the modules work with any two-dimensional
+raster map whose cell values are integer (e.g., 1, 2) or floating point
+(e.g., 1.1, 3.2) values. The <em>r.li.setup</em> module has options for
+controlling the shape, size, number, and distribution of sampling
+areas used to collect information about the landscape structure.
+Sampling area shapes can be the entire map or a moving
+window of square, rectangular or with circular shape. The size of
+sampling areas can be changed, so that the landscape can be analyzed
+at a variety of spatial scales simultaneously. Sampling areas may be
+distributed across the landscape in a random, systematic, or
+stratified-random manner, or as a moving window.
<p>
The <em>r.li</em> modules can calculate a number of measures that produce
-single values as output (e.g. mean patch size in the sampling area), as
-well as measures that produce a distribution of values as output (e.g.
-frequency distribution of patch sizes in the sampling area). The results
-are stored as raster maps.
+single values as output (e.g. mean patch size in the sampling area),
+as well as measures that produce a distribution of values as output
+(e.g. frequency distribution of patch sizes in the sampling area). The
+results are stored as raster maps.
<p>
-The general procedure to calculate an index from a raster map is
-two-fold:
+The general procedure to calculate an index from a raster map is two-fold:
<ol>
-<li>run <em>r.li.setup</em>: create a configuration file selecting the
- parts of raster to analyze.
+<li>run <em>r.li.setup</em>: create a configuration file selecting the parts of
+ raster to analyze.
-<li>run <em>r.li.'index'</em> (e.g., <em>r.li.patchdensity</em>) for
- calculate the selected index using on the areas selected on
- configuration file.
+<li>run <em>r.li.'index'</em> (e.g., <em>r.li.patchdensity</em>) for calculate the selected
+ index using on the areas selected on configuration file.
</ol>
+<h2>NOTE</h2>
-<h2>NOTES</h2>
-
-Also the <em>r.li.daemon</em> has a main function and it can be run, but
-it is only a template for development of new indices.
+Also the <em>r.li.daemon</em> has a main function and it can be run, but it is only a
+template for development of new indices.
<!-- mhh ??: -->
-The function itself has no meaning, it can only be used for debugging.
+The function itself has no meaning, it can be used only for debug.
-
<h2>EXAMPLE</h2>
To calculate a patch density index on a whole 'geology' raster map in the
@@ -81,10 +76,10 @@
r.li.setup
</pre></div>
<li> The main <em>r.li.setup</em> window is displayed, click on "New"
- <li> Now it is displayed the new configuration window, enter the
- configuration file name (e.g., "my_conf", do not use absolute
- paths) and the name of raster map (e.g., "geology"). The other
- fields are not needed for this configuration.
+ <li> Now it is displayed the new configuration window,
+ enter the configuration file name (e.g., "my_conf", do not use absolute paths)
+ and the name of raster map (e.g., "geology").
+ The other fields are not needed for this configuration.
<li> Click on "Setup sampling frame", select "Whole maplayer" and click "OK"
<li> Click on "Setup sampling areas", select "Moving window" and click "OK"
<li> Click on "Use keyboard to enter moving window dimension"
@@ -125,7 +120,6 @@
configuration file on a 200x200 raster map, then the sample area is
10x10.
-
<h2>SEE ALSO</h2>
<b>Core modules</b>:
Modified: grass/trunk/raster/r.li/r.li.mpa/r.li.mpa.html
===================================================================
--- grass/trunk/raster/r.li/r.li.mpa/r.li.mpa.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.mpa/r.li.mpa.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -13,28 +13,36 @@
</li>
</ul>
-<h2>EXAMPLES</h2>
-To calculate mean pixel attribute index on map my_map, using
-my_conf configuration file and saving results in
-my_out file run:<br>
-<div class="code"><pre>
-r.li.mpa input=my_map conf=my_conf output=my_out
-</pre></div>
+<h2>NOTES</h2>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder.<br>
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
If input raster is full of null values r.li.mpa consider to
have 0 patch.<br>
If area is 0 r.li.mpa returns -1; it is possible only if the
raster is masked <br>
If you want to have null values instead run <br>
<div class="code"><pre>
-r.null setnull=-1 map=my_map
+r.null setnull=-1 input=my_map
</pre></div>
after index calculation.
+<h2>EXAMPLES</h2>
+To calculate mean pixel attribute index on map my_map, using
+my_conf configuration file and saving results in
+my_out file run:<br>
+<div class="code"><pre>
+r.li.mpa input=my_map conf=my_conf output=my_out
+</pre></div>
+
+<h2>REFERENCES</h2>
+McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
+analysis program for quantifying landscape structure. USDA For. Serv.
+Gen. Tech. Rep. PNW-351. (<a href="http://treesearch.fs.fed.us/pubs/3064">PDF</a>)
+
<h2>SEE ALSO</h2>
<em>
<a href="r.li.html">r.li</a>
Modified: grass/trunk/raster/r.li/r.li.mps/r.li.mps.html
===================================================================
--- grass/trunk/raster/r.li/r.li.mps/r.li.mps.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.mps/r.li.mps.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -1,4 +1,5 @@
<h2>DESCRIPTION</h2>
+
<em>r.li.mps</em>
(mean patch size) calculates the mean size of the patches in the sampling area as:<br>
<img src="rlimps_formula.png"><br>
@@ -10,6 +11,22 @@
</li>
</ul>
+<h2>NOTES</h2>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+If the input raster contains NULL value cells, <em>r.li.mps</em>
+returns 0 for these cells. <br>
+If you want to keep NULL values instead, run subsequently on the resulting map:
+<div class="code"><pre>
+r.null setnull=0 input=my_map
+</pre></div>
+
+after index calculation.
+
<h2>EXAMPLES</h2>
To calculate mean path size index on map my_map, using
my_conf configuration file and saving results in
@@ -18,19 +35,11 @@
r.li.mps input=my_map conf=my_conf output=my_out
</pre></div>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder.
-<br>
-If input raster is full of null values r.li.mps returns 0.<br>
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=0 map=my_map
-</pre></div>
+<h2>REFERENCES</h2>
+McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
+analysis program for quantifying landscape structure. USDA For. Serv.
+Gen. Tech. Rep. PNW-351. (<a href="http://treesearch.fs.fed.us/pubs/3064">PDF</a>)
-after index calculation.
-
<h2>SEE ALSO</h2>
<em>
<a href="r.li.html">r.li</a>
Modified: grass/trunk/raster/r.li/r.li.padcv/r.li.padcv.html
===================================================================
--- grass/trunk/raster/r.li/r.li.padcv/r.li.padcv.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.padcv/r.li.padcv.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -12,6 +12,21 @@
<li><b>N<small>patch</small></b>: number of patch<br></li>
</ul>
+<h2>NOTES</h2>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+If input raster is not full of null values r.li.padcv returns a value >=0 that is PADcv. <br>
+If input raster is full of null values r.li.padcv returns -1. <br>
+If you want to have null values instead run <br>
+<div class="code"><pre>
+r.null setnull=-1 input=my_map
+</pre></div>
+after index calculation.
+
<h2>EXAMPLES</h2>
To calculate mean pixel attribute index on map my_map, using
my_conf configuration file and saving results in
@@ -20,26 +35,20 @@
r.li.padcv input=my_map conf=my_conf output=my_out
</pre></div>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder.<br>
-If input raster is not full of null values r.li.padcv returns a value >=0 that is PADcv. <br>
-If input raster is full of null values r.li.padcv returns -1. <br>
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=-1 map=my_map
-</pre></div>
-after index calculation.
-
<h2>SEE ALSO</h2>
<em>
<a href="r.li.html">r.li</a>
</em>
+<h2>REFERENCES</h2>
+McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
+analysis program for quantifying landscape structure. USDA For. Serv.
+Gen. Tech. Rep. PNW-351.
+
<h2>AUTHORS</h2>
Serena Pallecchi student of Computer Science University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI), Italy (www.faunalia.it)
-<p><i>Last changed: $Date$</i>
+<p>
+<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.padrange/r.li.padrange.html
===================================================================
--- grass/trunk/raster/r.li/r.li.padrange/r.li.padrange.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.padrange/r.li.padrange.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -1,4 +1,5 @@
<h2>DESCRIPTION</h2>
+
<em>r.li.padrange</em>
(patch area distribution range) calculates
as:<br>
@@ -17,18 +18,19 @@
r.li.padrange input=my_map conf=my_conf output=my_out
</pre></div>
-
<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder.<br>
-If input raster is not full of null values r.li.padrange returns a
-value >=0 that is PADcv. <br>
-If input raster is full of null values r.li.padrange returns -1. <br>
-If you want to have null values instead run <br>
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+If the input raster contains NULL value cells, <em>r.li.padrange</em>
+returns -1 for these cells. <br>
+If you want to keep NULL values instead, run subsequently on the resulting map:
+
<div class="code"><pre>
-r.null setnull=-1 map=my_map
+r.null setnull=-1 input=my_map
</pre></div>
after index calculation.
@@ -47,5 +49,6 @@
Serena Pallecchi student of Computer Science University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI), Italy (www.faunalia.it)
-<p><i>Last changed: $Date$</i>
+<p>
+<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.padsd/r.li.padsd.html
===================================================================
--- grass/trunk/raster/r.li/r.li.padsd/r.li.padsd.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.padsd/r.li.padsd.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -1,4 +1,5 @@
<h2>DESCRIPTION</h2>
+
<em>r.li.padsd</em> (patch area distribution standard deviation) calculates as:<br>
<img src="rlipadsd_formula.png"> <br>
with:<br>
@@ -8,6 +9,23 @@
<li><b>N<small>patch</small></b>: number of patch<br></li>
</ul>
+<h2>NOTES</h2>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+If input raster is not full of null values <em>r.li.padsd</em> returns a
+value >=0 that is PADsd. <br>
+If input raster is full of null values <em>r.li.padsd</em> returns -1. <br>
+If you want to have null values instead run <br>
+<div class="code"><pre>
+r.null setnull=-1 input=my_map
+</pre></div>
+
+after index calculation.
+
<h2>EXAMPLES</h2>
To calculate mean pixel attribute index on map my_map, using
my_conf configuration file and saving results in
@@ -16,19 +34,6 @@
r.li.padsd input=my_map conf=my_conf output=my_out
</pre></div>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder.<br>
-If input raster is not full of null values r.li.padsd returns a value >=0 that is PADsd. <br>
-If input raster is full of null values r.li.padsd returns -1. <br>
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=-1 map=my_map
-</pre></div>
-
-after index calculation.
-
<h2>REFERENCES</h2>
McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
analysis program for quantifying landscape structure. USDA For. Serv.
@@ -43,4 +48,5 @@
Serena Pallecchi student of Computer Science University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI), Italy (www.faunalia.it)
-<p><i>Last changed: $Date$</i>
+<p>
+<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.patchdensity/r.li.patchdensity.html
===================================================================
--- grass/trunk/raster/r.li/r.li.patchdensity/r.li.patchdensity.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.patchdensity/r.li.patchdensity.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -10,6 +10,23 @@
that is 1000000 by number of patch for area unit.
This index is calculated using a 4 neighbour algorithm.
+<h2>NOTES</h2>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+A map of NULL values is considered to have zero patches. <br>
+If you want to have null values instead run <br>
+<div class="code"><pre>
+r.null setnull=0 map=my_out
+</pre></div>
+after index calculation.<br>
+<!-- next ??????: -->
+If raster area is 0, <em>r.li.patchdensity</em> returns -1. This is only
+possible if the raster is masked.
+
<h2>EXAMPLES</h2>
To calculate patch density index on map <em>my_map</em>, using
@@ -37,27 +54,12 @@
d.vect forests type=boundary
</pre></div>
-
-<h2>NOTES</h2>
-
-A map of NULL values is considered to have zero patches. <br>
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=0 map=my_out
-</pre></div>
-after index calculation.<br>
-<!-- next ??????: -->
-If raster area is 0, <em>r.li.patchdensity</em> returns -1. This is only
-possible if the raster is masked.
-
-
<h2>SEE ALSO</h2>
-<em><a href="r.li.html">r.li</A></em> package overview <br>
-<em><a href="r.li.daemon.html">r.li.daemon</A></em><br>
-<em><a href="r.li.setup.html">r.li.setup</A></em>
+<em><a href="r.li.html">r.li</a></em> package overview <br>
+<em><a href="r.li.daemon.html">r.li.daemon</a></em><br>
+<em><a href="r.li.setup.html">r.li.setup</a></em>
-
<h2>AUTHORS</h2>
Claudio Porta and Lucio Davide Spano, students of Computer Science
Modified: grass/trunk/raster/r.li/r.li.patchnum/r.li.patchnum.html
===================================================================
--- grass/trunk/raster/r.li/r.li.patchnum/r.li.patchnum.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.patchnum/r.li.patchnum.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -1,9 +1,24 @@
<h2>DESCRIPTION</h2>
+
<em>r.li.patchnum</em> is a patch index for r.li program.<br>
It calculates the function <br>
<I> f(sample_area)= Patch_Number </I><br>
This index is calculated using a 4 neighbour algorithm<br>
+<h2>NOTES</h2>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+An that is full of null values is considered to have zero patch. <br>
+If you want to have null values instead run <br>
+<div class="code"><pre>
+r.null setnull=0 input=my_map
+</pre></div>
+after index calculation.<br>
+
<h2>EXAMPLES</h2>
To calculate patch number index on map my_map, using
<em>my_conf</em> configuration file and saving results in
@@ -12,23 +27,20 @@
r.li.patchnumber input=my_map conf=my_conf out=my_out
</pre></div>
-<h2>NOTES</h2>
+<h2>REFERENCES</h2>
+McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
+analysis program for quantifying landscape structure. USDA For. Serv.
+Gen. Tech. Rep. PNW-351. (<a href="http://treesearch.fs.fed.us/pubs/3064">PDF</a>)
-An that is full of null values is considered to have zero patch. <br>
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=0 map=my_map
-</pre></div>
-after index calculation.<br>
-
<h2>SEE ALSO</h2>
-<em><a href="r.li.html">r.li</A></em> package overview <br>
-<em><a href="r.li.daemon.html">r.li.daemon</A></em><br>
-<em><a href="r.li.setup.html">r.li.setup</A></em>
+<em><a href="r.li.html">r.li</a></em> package overview <br>
+<em><a href="r.li.daemon.html">r.li.daemon</a></em><br>
+<em><a href="r.li.setup.html">r.li.setup</a></em>
<h2>AUTHORS</h2>
Claudio Porta and Lucio Davide Spano, students of Computer Science
University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI) (www.faunalia.it)<br>
-<p><i>Last changed: $Date$</i>
+<p>
+<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.pielou/r.li.pielou.html
===================================================================
--- grass/trunk/raster/r.li/r.li.pielou/r.li.pielou.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.pielou/r.li.pielou.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -10,16 +10,19 @@
</ul>
<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-<tt>~/.r.li/output/</tt> folder.
-<br>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+
If the input raster contains NULL value cells, <em>r.li.pielou</em>
returns -1 for these cells. <br>
If you want to keep NULL values instead, run subsequently on the resulting map:
<br>
<div class="code"><pre>
-r.null setnull=-1 map=my_map
+r.null setnull=-1 input=my_map
</pre></div>
<h2>EXAMPLES</h2>
@@ -27,7 +30,7 @@
previously created "my_conf" configuration file (<em>r.li.setup</em>)
and saving results in "my_out" raster map, run:<br>
<div class="code"><pre>
-r.li.pielou map=my_map conf=my_conf output=my_out
+r.li.pielou input=my_map conf=my_conf output=my_out
</pre></div>
<h2>REFERENCES</h2>
@@ -45,5 +48,6 @@
Luca Delucchi and Duccio Rocchini, Fondazione E. Mach (Italy), based on the <em>r.li.shannon</em> code
developed by Serena Pallecchi student of Computer Science University of Pisa (Italy).<br>
-<p><i>Last changed: $Date$</i>
+<p>
+<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.renyi/r.li.renyi.html
===================================================================
--- grass/trunk/raster/r.li/r.li.renyi/r.li.renyi.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.renyi/r.li.renyi.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -1,4 +1,5 @@
<h2>DESCRIPTION</h2>
+
<em>r.li.renyi</em>
calculates the "renyi's diversity index" as:<br>
<img src="r_li_renyi.png"> <br>
@@ -12,38 +13,29 @@
</ul>
<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-<tt>~/.r.li/output/</tt> folder.
-<br>
-If the input raster contains NULL value cells, <em>r.li.renyi</em>
-returns -1 for these cells. <br>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+
+If input raster contain NULL values <em>r.li.renyi</em> returns -1.<br>
If you want to keep NULL values instead, run subsequently on the resulting map:
-<br>
<div class="code"><pre>
-r.null setnull=-1 map=my_map
+r.null setnull=-1 input=my_map
</pre></div>
+after index calculation.
<h2>EXAMPLES</h2>
+
To calculate Renyi's diversity index on map "my_map", using the
previously created "my_conf" configuration file (<em>r.li.setup</em>)
and saving results in "my_out" raster map, run:<br>
<div class="code"><pre>
-r.li.renyi map=my_map conf=my_conf output=my_out alpha=0.6
+r.li.renyi input=my_map conf=my_conf output=my_out alpha=0.6
</pre></div>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder. <br>
-
-If input raster is full of null values <em>r.li.renyi</em> returns -1.<br>
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=-1 map=my_map
-</pre></div>
-after index calculation.
-
<h2>REFERENCES</h2>
McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
analysis program for quantifying landscape structure. USDA For. Serv.
@@ -56,8 +48,10 @@
</em>
<h2>AUTHORS</h2>
-Luca Delucchi and Duccio Rocchini, Fondazione E. Mach (Italy), based on the <em>r.li.shannon</em> code
-developed by Serena Pallecchi student of Computer Science University of Pisa (Italy).<br>
+Luca Delucchi and Duccio Rocchini, Fondazione E. Mach (Italy), based on
+the <em>r.li.shannon</em> code developed by Serena Pallecchi student of
+Computer Science University of Pisa (Italy).<br>
-<p><i>Last changed: $Date$</i>
+<p>
+<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.richness/r.li.richness.html
===================================================================
--- grass/trunk/raster/r.li/r.li.richness/r.li.richness.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.richness/r.li.richness.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -6,22 +6,26 @@
<li><b>m</b>: number of different patch type</li>
</ul>
+<h2>NOTES</h2>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+
+If input raster is full of null values r.li.richness returns -1.<br>
+If you want to have null values instead run <br>
+after index calculation.
+
<h2>EXAMPLES</h2>
+
To calculate richness's diversity index on map my_map, using
my_conf configuration file and saving results in my_out file run:<br>
<div class="code"><pre>
r.li.richness input=my_map conf=my_conf output=my_out
</pre></div>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder. <br>
-
-If input raster is full of null values r.li.richness returns -1.<br>
-If you want to have null values instead run <br>
-after index calculation.
-
<h2>REFERENCES</h2>
McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
analysis program for quantifying landscape structure. USDA For. Serv.
@@ -36,5 +40,6 @@
Serena Pallecchi student of Computer Science University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI), Italy (www.faunalia.it)
-<p><i>Last changed: $Date$</i>
+<p>
+<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.setup/r.li.setup.html
===================================================================
--- grass/trunk/raster/r.li/r.li.setup/r.li.setup.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.setup/r.li.setup.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -74,7 +74,7 @@
<li><em>Whole map layer</em>: the sample frame is the whole map
<li><em>Keyboard setting</em>: the user enters the coordinates in
cells of upper left corner of sampling frame and its length in
- rows and columns
+ rows and columns.
<li><em>Draw the sample frame</em>: the user draws the sample frame
on map using mouse.
</ul>
@@ -137,17 +137,16 @@
relative coordinates.
<h2>SEE ALSO</h2>
-<em><a href="http://grass.osgeo.org/gdp/landscape/r_le_manual5.pdf">
-old r.le manual</A></em><br>
-<em><a href="r.li.html">r.li</A></em> package overview <br>
-<em><a href="r.li.daemon.html">r.li.daemon</A></em>,
-<em><a href="r.li.patchdensity.html">r.li.patchdensity</A></em>
+<em><a href="http://grass.osgeo.org/gdp/landscape/r_le_manual5.pdf">old r.le manual</a></em><br>
+<em><a href="r.li.html">r.li</a></em> package overview <br>
+<em><a href="r.li.daemon.html">r.li.daemon</a></em>,
+<em><a href="r.li.patchdensity.html">r.li.patchdensity</a></em>
<h2>AUTHORS</h2>
Claudio Porta and Lucio Davide Spano, students of Computer Science
University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI)<br>
-Rebuild of r.le.setup from William L. Baker
+Rebuild of <em>r.le.setup</em> from William L. Baker
<p>
<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.shannon/r.li.shannon.html
===================================================================
--- grass/trunk/raster/r.li/r.li.shannon/r.li.shannon.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.shannon/r.li.shannon.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -6,14 +6,26 @@
<ul>
<li><b>i</b>: patch type<br></li>
<li><b>m</b>: number of patch type<br></li>
- <li><b>p<small><small>i</small></small></b>: proportion of the landscape occupied by patch type i<br></li>
+ <li><b>p<small><small>i</small></small></b>: proportion of the landscape
+ occupied by patch type i<br></li>
</ul>
-<h2>REFERENCES</h2>
-McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
-analysis program for quantifying landscape structure. USDA For. Serv.
-Gen. Tech. Rep. PNW-351.
+<h2>NOTES</h2>
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+If input raster is full of null values r.li.shannon returns -1. <br>
+<!-- does that mean the program exit code or raster values?? -->
+If you want to have null values instead run <br>
+<div class="code"><pre>
+r.null setnull=-1 input=my_map
+</pre></div>
+after index calculation.
+
+
<h2>EXAMPLES</h2>
To calculate shannon's diversity index on map my_map, using
my_conf configuration file and saving results in my_out file run:<br>
@@ -21,23 +33,16 @@
r.li.shannon input=my_map conf=my_conf output=my_out
</pre></div>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder. <br>
-If input raster is full of null values r.li.shannon returns -1. <br>
-<!-- does that mean the program exit code or raster values?? -->
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=-1 map=my_map
-</pre></div>
-after index calculation.
-
<h2>SEE ALSO</h2>
<em>
<a href="r.li.html">r.li</a>
</em>
+<h2>REFERENCES</h2>
+McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
+analysis program for quantifying landscape structure. USDA For. Serv.
+Gen. Tech. Rep. PNW-351.
+
<h2>AUTHORS</h2>
Serena Pallecchi student of Computer Science University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI), Italy (www.faunalia.it)
Modified: grass/trunk/raster/r.li/r.li.shape/r.li.shape.html
===================================================================
--- grass/trunk/raster/r.li/r.li.shape/r.li.shape.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.shape/r.li.shape.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -3,6 +3,22 @@
It calculates the function <br>
<I> f(sample_area)= Area </I><br>
+<h2>NOTES</h2>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+
+If the input raster contains NULL value cells, <em>r.li.shape</em>
+returns -1 for these cells. <br>
+If you want to keep NULL values instead, run subsequently on the resulting map:
+<br>
+<div class="code"><pre>
+r.null setnull=-1 input=my_map
+</pre></div>
+
<h2>EXAMPLES</h2>
To calculate area index on map my_map, using
<em>my_conf</em> configuration file and saving results in
@@ -12,13 +28,19 @@
</pre></div>
<h2>SEE ALSO</h2>
-<em><a href="r.li.html">r.li</A></em> package overview <br>
-<em><a href="r.li.daemon.html">r.li.daemon</A></em><br>
-<em><a href="r.li.setup.html">r.li.setup</A></em>
+<em><a href="r.li.html">r.li</a></em> package overview <br>
+<em><a href="r.li.daemon.html">r.li.daemon</a></em><br>
+<em><a href="r.li.setup.html">r.li.setup</a></em>
+<h2>REFERENCES</h2>
+McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
+analysis program for quantifying landscape structure. USDA For. Serv.
+Gen. Tech. Rep. PNW-351. (<a href="http://treesearch.fs.fed.us/pubs/3064">PDF</a>)
+
<h2>AUTHORS</h2>
Claudio Porta and Lucio Davide Spano, students of Computer Science
University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI) (www.faunalia.it)<br>
-<p><i>Last changed: $Date$</i>
+<p>
+<i>Last changed: $Date$</i>
Modified: grass/trunk/raster/r.li/r.li.simpson/r.li.simpson.html
===================================================================
--- grass/trunk/raster/r.li/r.li.simpson/r.li.simpson.html 2014-02-03 21:22:36 UTC (rev 58862)
+++ grass/trunk/raster/r.li/r.li.simpson/r.li.simpson.html 2014-02-03 21:48:32 UTC (rev 58863)
@@ -10,6 +10,21 @@
occupied by patch type i<br> </li>
</ul>
+<h2>NOTES</h2>
+
+Do not use absolute path names for the <b>output</b> map/file.
+If the "moving window" method was selected in <b>r.li.setup</b>, then the
+output will be a raster map, otherwise an ASCII file will be generated in
+the <tt>~/.r.li/output/</tt> folder.
+<p>
+
+If input raster is full of null values <em>r.li.simpson</em> returns -1.<br>
+If you want to have null values instead run <br>
+<div class="code"><pre>
+r.null setnull=-1 input=my_map
+</pre></div>
+after index calculation.
+
<h2>EXAMPLES</h2>
To calculate simpson's diversity index on map my_map, using
my_conf configuration file and saving results in my_out file run:<br>
@@ -17,18 +32,11 @@
r.li.simpson input=my_map conf=my_conf output=my_out
</pre></div>
-<h2>NOTES</h2>
-Do not use absolute path names for output files. They are raster if
-moving window disposition was selected, otherwise they are in
-~/.r.li/output folder. <br>
+<h2>REFERENCES</h2>
+McGarigal, K., and B. J. Marks. 1995. FRAGSTATS: spatial pattern
+analysis program for quantifying landscape structure. USDA For. Serv.
+Gen. Tech. Rep. PNW-351. (<a href="http://treesearch.fs.fed.us/pubs/3064">PDF</a>)
-If input raster is full of null values r.li.simpson returns -1.<br>
-If you want to have null values instead run <br>
-<div class="code"><pre>
-r.null setnull=-1 map=my_map
-</pre></div>
-after index calculation.
-
<h2>SEE ALSO</h2>
<em>
<a href="r.li.html">r.li</a>
@@ -38,5 +46,5 @@
Serena Pallecchi student of Computer Science University of Pisa (Italy).<br>
Commission from Faunalia Pontedera (PI), Italy (www.faunalia.it)
-<p><i>Last changed: $Date$</i>
-
+<p>
+<i>Last changed: $Date$</i>
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