[GRASS-SVN] r60066 - in grass/trunk/gui/wxpython: modules scripts
svn_grass at osgeo.org
svn_grass at osgeo.org
Sun May 4 03:09:52 PDT 2014
Author: martinl
Date: 2014-05-04 03:09:52 -0700 (Sun, 04 May 2014)
New Revision: 60066
Added:
grass/trunk/gui/wxpython/modules/vkrige.py
Removed:
grass/trunk/gui/wxpython/scripts/vkrige.py
Log:
move vkrige from scripts to modules
Copied: grass/trunk/gui/wxpython/modules/vkrige.py (from rev 60058, grass/trunk/gui/wxpython/scripts/vkrige.py)
===================================================================
--- grass/trunk/gui/wxpython/modules/vkrige.py (rev 0)
+++ grass/trunk/gui/wxpython/modules/vkrige.py 2014-05-04 10:09:52 UTC (rev 60066)
@@ -0,0 +1,511 @@
+"""
+MODULE: vkrige
+
+AUTHOR(S): Anne Ghisla <a.ghisla AT gmail.com>
+
+PURPOSE: Dedicated GUI for v.krige script.
+
+DEPENDS: R 2.x, packages gstat, maptools and spgrass6, optional: automap
+
+COPYRIGHT: (C) 2009 by the GRASS Development Team
+
+This program is free software under the GNU General Public
+License (>=v2). Read the file COPYING that comes with GRASS
+for details.
+"""
+
+#@TODO move here imports related to wxGUI
+
+### generic imports
+import os, sys
+from tempfile import gettempdir
+import time
+import thread
+from core.utils import _
+
+### dependencies to be checked once, as they are quite
+### time-consuming. cfr. grass.parser.
+
+try:
+ import grass.script as grass
+except ImportError:
+ sys.exit(_("No GRASS-python library found."))
+
+from core import globalvar
+from gui_core import gselect
+from core import gconsole
+from gui_core import goutput
+from core.settings import UserSettings
+from gui_core.widgets import GNotebook
+from core.giface import Notification
+#import help
+
+import wx
+#import wx.lib.plot as plot # for plotting the variogram.
+import rpy2.robjects as robjects
+import rpy2.rinterface as rinterface
+
+# global variables
+maxint = 1e6 # instead of sys.maxint, not working with SpinCtrl on 64bit [reported by Bob Moskovitz]
+
+#@TODO move away functions not regarding the GUI
+
+class KrigingPanel(wx.Panel):
+ """ Main panel. Contains all widgets except Menus and Statusbar. """
+ def __init__(self, parent, Rinstance, controller, *args, **kwargs):
+ wx.Panel.__init__(self, parent, *args, **kwargs)
+
+ self.parent = parent
+ self.border = 4
+
+ # 1. Input data
+ InputBoxSizer = wx.StaticBoxSizer(wx.StaticBox(self, id = wx.ID_ANY, label = _("Input Data")),
+ orient = wx.HORIZONTAL)
+
+ flexSizer = wx.FlexGridSizer(cols = 3, hgap = 5, vgap = 5)
+ flexSizer.AddGrowableCol(1)
+
+ flexSizer.Add(item = wx.StaticText(self, id = wx.ID_ANY, label = _("Point dataset:")),
+ flag = wx.ALIGN_CENTER_VERTICAL)
+ self.InputDataMap = gselect.VectorSelect(parent = self,
+ ftype = 'points',
+ updateOnPopup = False)
+ self.InputDataMap.SetFocus()
+ flexSizer.Add(item = self.InputDataMap, flag = wx.ALIGN_CENTER_VERTICAL)
+
+ RefreshButton = wx.Button(self, id = wx.ID_REFRESH)
+ RefreshButton.Bind(wx.EVT_BUTTON, self.OnButtonRefresh)
+ flexSizer.Add(item = RefreshButton, flag = wx.ALIGN_CENTER_VERTICAL)
+
+ flexSizer.Add(item = wx.StaticText(self, id = wx.ID_ANY, label = _("Numeric column:")),
+ flag = wx.ALIGN_CENTER_VERTICAL)
+ self.InputDataColumn = gselect.ColumnSelect(self, id = wx.ID_ANY)
+ flexSizer.Add(item = self.InputDataColumn)
+
+ self.InputDataMap.GetChildren()[0].Bind(wx.EVT_TEXT, self.OnInputMapChanged)
+ self.InputDataColumn.GetChildren()[0].Bind(wx.EVT_TEXT, self.OnInputColumnChanged)
+
+ InputBoxSizer.Add(item = flexSizer)
+
+ # 2. Kriging. In book pages one for each R package. Includes variogram fit.
+ KrigingSizer = wx.StaticBoxSizer(wx.StaticBox(self, id = wx.ID_ANY, label = _("Kriging")), wx.HORIZONTAL)
+
+ self.RPackagesBook = GNotebook(parent = self, style = globalvar.FNPageDStyle)
+
+ for Rpackage in ["gstat"]: # , "geoR"]: #@TODO: enable it if/when it'll be implemented.
+ self.CreatePage(package = Rpackage, Rinstance = Rinstance, controller = controller)
+
+ ## Command output. From menuform module, cmdPanel class
+ self._gconsole = gconsole.GConsole(guiparent = self)
+ self.goutput = goutput.GConsoleWindow(parent = self, gconsole = self._gconsole, margin = False)
+ self.goutputId = self.RPackagesBook.GetPageCount()
+ self.outpage = self.RPackagesBook.AddPage(page = self.goutput, text = _("Command output"), name = 'output')
+ self._gconsole.Bind(gconsole.EVT_CMD_RUN,
+ lambda event:
+ self._switchPageHandler(event=event, notification=Notification.MAKE_VISIBLE))
+ self._gconsole.Bind(gconsole.EVT_CMD_DONE,
+ lambda event:
+ self._switchPageHandler(event=event, notification=Notification.RAISE_WINDOW))
+ self.RPackagesBook.SetSelection(0)
+ KrigingSizer.Add(self.RPackagesBook, proportion = 1, flag = wx.EXPAND)
+
+ # 3. Output Parameters.
+ OutputSizer = wx.StaticBoxSizer(wx.StaticBox(self, id = wx.ID_ANY, label = _("Output")), wx.HORIZONTAL)
+
+ OutputParameters = wx.GridBagSizer(hgap = 5, vgap = 5)
+ OutputParameters.Add(item = wx.StaticText(self, id = wx.ID_ANY, label = _("Name for the output raster map:")),
+ flag = wx.ALIGN_CENTER_VERTICAL,
+ pos = (0, 0))
+ self.OutputMapName = gselect.Select(parent = self, id = wx.ID_ANY,
+ type = 'raster',
+ mapsets = [grass.gisenv()['MAPSET']])
+ OutputParameters.Add(item = self.OutputMapName, flag = wx.EXPAND | wx.ALL,
+ pos = (0, 1))
+ self.VarianceRasterCheckbox = wx.CheckBox(self, id = wx.ID_ANY, label = _("Export variance map as well: "))
+ self.VarianceRasterCheckbox.SetValue(state = True)
+ OutputParameters.Add(item = self.VarianceRasterCheckbox,
+ flag = wx.ALIGN_CENTER_VERTICAL,
+ pos = (1, 0))
+ self.OutputVarianceMapName = gselect.Select(parent = self, id = wx.ID_ANY,
+ type = 'raster',
+ mapsets = [grass.gisenv()['MAPSET']])
+ self.VarianceRasterCheckbox.Bind(wx.EVT_CHECKBOX, self.OnVarianceCBChecked)
+ OutputParameters.Add(item = self.OutputVarianceMapName, flag = wx.EXPAND | wx.ALL,
+ pos = (1, 1))
+
+ self.OverwriteCheckBox = wx.CheckBox(self, id = wx.ID_ANY,
+ label = _("Allow output files to overwrite existing files"))
+ self.OverwriteCheckBox.SetValue(UserSettings.Get(group='cmd', key='overwrite', subkey='enabled'))
+ OutputParameters.Add(item = self.OverwriteCheckBox,
+ pos = (2, 0), span = (1, 2))
+
+ OutputParameters.AddGrowableCol(1)
+ OutputSizer.Add(OutputParameters, proportion = 0, flag = wx.EXPAND | wx.ALL, border = self.border)
+
+ # 4. Run Button and Quit Button
+ ButtonSizer = wx.BoxSizer(wx.HORIZONTAL)
+ HelpButton = wx.Button(self, id = wx.ID_HELP)
+ HelpButton.Bind(wx.EVT_BUTTON, self.OnHelpButton)
+ QuitButton = wx.Button(self, id = wx.ID_EXIT)
+ QuitButton.Bind(wx.EVT_BUTTON, self.OnCloseWindow)
+ self.RunButton = wx.Button(self, id = wx.ID_ANY, label = _("&Run")) # no stock ID for Run button..
+ self.RunButton.Bind(wx.EVT_BUTTON, self.OnRunButton)
+ self.RunButton.Enable(False) # disable it on loading the interface, as input map is not set
+ ButtonSizer.Add(HelpButton, proportion = 0, flag = wx.ALIGN_LEFT | wx.ALL, border = self.border)
+ ButtonSizer.Add(QuitButton, proportion = 0, flag = wx.ALIGN_RIGHT | wx.ALL, border = self.border)
+ ButtonSizer.Add(self.RunButton, proportion = 0, flag = wx.ALIGN_RIGHT | wx.ALL, border = self.border)
+
+ # Main Sizer. Add each child sizer as soon as it is ready.
+ Sizer = wx.BoxSizer(wx.VERTICAL)
+ Sizer.Add(InputBoxSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = self.border)
+ Sizer.Add(KrigingSizer, proportion = 1, flag = wx.EXPAND | wx.ALL, border = self.border)
+ Sizer.Add(OutputSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = self.border)
+ Sizer.Add(ButtonSizer, proportion = 0, flag = wx.ALIGN_RIGHT | wx.ALL, border = self.border)
+ self.SetSizerAndFit(Sizer)
+
+ # last action of __init__: update imput data list.
+ # it's performed in the few seconds gap while user examines interface before clicking anything.
+ #@TODO: implement a splashcreen IF the maps cause a noticeable lag [markus' suggestion]
+ self.InputDataMap.GetElementList()
+
+ def CreatePage(self, package, Rinstance, controller):
+ """ Creates the three notebook pages, one for each R package """
+ for package in ["gstat"]: #@TODO add here other packages when they will be implemented
+ classobj = eval("RBook"+package+"Panel")
+ setattr(self, "RBook"+package+"Panel", (classobj(self,
+ id = wx.ID_ANY,
+ Rinstance = Rinstance,
+ controller = controller)))
+ self.RPackagesBook.AddPage(page = getattr(self, "RBook"+package+"Panel"), text = package)
+
+ def OnButtonRefresh(self, event):
+ """ Forces refresh of list of available layers. """
+ self.InputDataMap.GetElementList()
+
+ def OnCloseWindow(self, event):
+ """ Cancel button pressed"""
+ self.parent.Close()
+ event.Skip()
+
+ def OnHelpButton(self, event):
+ grass.run_command('g.manual', entry = 'v.krige')
+ event.Skip()
+
+ def OnInputMapChanged(self, event):
+ """ Refreshes list of columns."""
+ MapName = event.GetString()
+ self.InputDataColumn.InsertColumns(vector = MapName,
+ layer = 1, excludeKey = False,
+ type = ['integer', 'double precision'])
+
+ def OnInputColumnChanged(self, event):
+ """Fills output map name TextCtrl """
+ MapName = self.InputDataMap.GetValue()
+ enable = bool(self.InputDataColumn.GetValue())
+ self.RunButton.Enable(enable)
+ self.RBookgstatPanel.PlotButton.Enable(enable)
+
+ if enable:
+ self.OutputMapName.SetValue(MapName.split("@")[0]+"_kriging")
+ self.OutputVarianceMapName.SetValue(MapName.split("@")[0]+"_kriging.var")
+ else:
+ self.OutputMapName.SetValue('')
+ self.OutputVarianceMapName.SetValue('')
+
+ def OnRunButton(self,event):
+ """ Execute R analysis. """
+ #@FIXME: send data to main method instead of running it here.
+
+ #-1: get the selected notebook page. The user shall know that [s]he can modify settings in all
+ # pages, but only the selected one will be executed when Run is pressed.
+ SelectedPanel = self.RPackagesBook.GetCurrentPage()
+
+ if self.RPackagesBook.GetPageText(self.RPackagesBook.GetSelection()) == 'Command output':
+ self._gconsole.WriteError("No parameters for running. Please select \"gstat\" tab, check parameters and re-run.")
+ return False # no break invoked by above function
+
+ # mount command string as it would have been written on CLI
+ command = ["v.krige", "input=" + self.InputDataMap.GetValue(),
+ "column=" + self.InputDataColumn.GetValue(),
+ "output=" + self.OutputMapName.GetValue(),
+ "package=" + '%s' % self.RPackagesBook.GetPageText(self.RPackagesBook.GetSelection())]
+
+ if not hasattr(SelectedPanel, 'VariogramCheckBox') or not SelectedPanel.VariogramCheckBox.IsChecked():
+ command.append("model=" + '%s' % SelectedPanel.ModelChoicebox.GetStringSelection().split(" ")[0])
+
+ for i in ['Sill', 'Nugget', 'Range']:
+ if getattr(SelectedPanel, i+"ChextBox").IsChecked():
+ command.append(i.lower() + "=" + '%s' % getattr(SelectedPanel, i+'Ctrl').GetValue())
+
+ if SelectedPanel.KrigingRadioBox.GetStringSelection() == "Block kriging":
+ command.append("block=" + '%s' % SelectedPanel.BlockSpinBox.GetValue())
+ if self.OverwriteCheckBox.IsChecked():
+ command.append("--overwrite")
+ if self.VarianceRasterCheckbox.IsChecked():
+ command.append("output_var=" + self.OutputVarianceMapName.GetValue())
+
+ # give it to the output console
+ #@FIXME: it runs the command as a NEW instance. Reimports data, recalculates variogram fit..
+ #otherwise I can use Controller() and mimic RunCmd behaviour.
+ self._gconsole.RunCmd(command)
+
+ def OnVarianceCBChecked(self, event):
+ self.OutputVarianceMapName.Enable(event.IsChecked())
+
+ def _switchPageHandler(self, event, notification):
+ self._switchPage(notification=notification)
+ event.Skip()
+
+ def _switchPage(self, notification):
+ """!Manages @c 'output' notebook page according to event notification."""
+ if notification == Notification.HIGHLIGHT:
+ self.RPackagesBook.HighlightPageByName('output')
+ if notification == Notification.MAKE_VISIBLE:
+ self.RPackagesBook.SetSelectionByName('output')
+ if notification == Notification.RAISE_WINDOW:
+ self.RPackagesBook.SetSelectionByName('output')
+ self.SetFocus()
+ self.Raise()
+
+
+class KrigingModule(wx.Frame):
+ """ Kriging module for GRASS GIS. Depends on R and its packages gstat and geoR. """
+ def __init__(self, parent, Rinstance, controller, *args, **kwargs):
+ wx.Frame.__init__(self, parent, *args, **kwargs)
+ # setting properties and all widgettery
+ self.SetTitle(_("Kriging Module"))
+ self.SetIcon(wx.Icon(os.path.join(globalvar.ICONDIR, 'grass_dialog.ico'), wx.BITMAP_TYPE_ICO))
+ self.log = Log(self)
+ self.CreateStatusBar()
+ self.log.message(_("Ready."))
+
+ self.Panel = KrigingPanel(self, Rinstance, controller)
+ self.SetMinSize(self.GetBestSize())
+ self.SetSize(self.GetBestSize())
+
+class Log:
+ """ The log output is redirected to the status bar of the containing frame. """
+ def __init__(self, parent):
+ self.parent = parent
+
+ def message(self, text_string):
+ """ Updates status bar """
+ self.parent.SetStatusText(text_string.strip())
+
+class RBookPanel(wx.Panel):
+ """ Generic notebook page with shared widgets and empty kriging functions. """
+ def __init__(self, parent, *args, **kwargs):
+ wx.Panel.__init__(self, parent, *args, **kwargs)
+
+ self.parent = parent
+
+ self.VariogramSizer = wx.StaticBoxSizer(wx.StaticBox(self,
+ id = wx.ID_ANY,
+ label = _("Variogram fitting")),
+ wx.HORIZONTAL)
+ self.LeftSizer = wx.BoxSizer(wx.VERTICAL)
+ self.RightSizer = wx.BoxSizer(wx.VERTICAL)
+ self.ParametersSizer = wx.GridBagSizer(vgap = 5, hgap = 5)
+
+ self.VariogramSizer.Add(self.LeftSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
+ self.VariogramSizer.Add(self.RightSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
+
+ # left side of Variogram fitting. The checkboxes and spinctrls.
+ self.PlotButton = wx.Button(self, id = wx.ID_ANY, label = _("Plot/refresh variogram")) # no stock ID for Run button..
+ self.PlotButton.Bind(wx.EVT_BUTTON, self.OnPlotButton)
+ self.PlotButton.Enable(False) # grey it out until a suitable layer is available
+ self.LeftSizer.Add(self.PlotButton, proportion = 0, flag = wx.ALL, border = parent.border)
+ self.LeftSizer.Add(self.ParametersSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
+
+ self.ParametersList = ["Sill", "Nugget", "Range"]
+ MinValues = [0,0,1]
+ for n in self.ParametersList:
+ setattr(self, n+"ChextBox", wx.CheckBox(self,
+ id = self.ParametersList.index(n),
+ label = _(n + ":")))
+ setattr(self, n+"Ctrl", (wx.SpinCtrl(self,
+ id = wx.ID_ANY,
+ min = MinValues[self.ParametersList.index(n)],
+ max = maxint)))
+ getattr(self, n+"ChextBox").Bind(wx.EVT_CHECKBOX,
+ self.UseValue,
+ id = self.ParametersList.index(n))
+ setattr(self, n+"Sizer", (wx.BoxSizer(wx.HORIZONTAL)))
+ self.ParametersSizer.Add(getattr(self, n+"ChextBox"),
+ flag = wx.ALIGN_CENTER_VERTICAL,
+ pos = (self.ParametersList.index(n),0))
+ self.ParametersSizer.Add(getattr(self, n+"Ctrl"),
+ flag = wx.EXPAND | wx.ALIGN_CENTER_VERTICAL,
+ pos = (self.ParametersList.index(n),1))
+
+ # right side of the Variogram fitting. The plot area.
+ #Plot = wx.StaticText(self, id= wx.ID_ANY, label = "Check Plot Variogram to interactively fit model.")
+ #PlotPanel = wx.Panel(self)
+ #self.PlotArea = plot.PlotCanvas(PlotPanel)
+ #self.PlotArea.SetInitialSize(size = (250,250))
+ #self.RightSizer.Add(PlotPanel, proportion=0, flag= wx.EXPAND|wx.ALL, border=parent.border)
+
+ self.KrigingSizer = wx.StaticBoxSizer(wx.StaticBox(self,
+ id = wx.ID_ANY,
+ label = _("Kriging techniques")),
+ wx.VERTICAL)
+
+ KrigingList = ["Ordinary kriging", "Block kriging"]#, "Universal kriging"] #@FIXME: i18n on the list?
+ self.KrigingRadioBox = wx.RadioBox(self,
+ id = wx.ID_ANY,
+ choices = KrigingList,
+ majorDimension = 1,
+ style = wx.RA_SPECIFY_COLS)
+ self.KrigingRadioBox.Bind(wx.EVT_RADIOBOX, self.HideBlockOptions)
+ self.KrigingSizer.Add(self.KrigingRadioBox, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
+
+ # block kriging parameters. Size.
+ BlockSizer = wx.BoxSizer(wx.HORIZONTAL)
+ BlockLabel = wx.StaticText(self, id = wx.ID_ANY, label = _("Block size:"))
+ self.BlockSpinBox = wx.SpinCtrl(self, id = wx.ID_ANY, min = 1, max = maxint)
+ self.BlockSpinBox.Enable(False) # default choice is Ordinary kriging so block param is disabled
+ BlockSizer.Add(BlockLabel, flag = wx.ALIGN_CENTER_VERTICAL | wx.ALL, border = parent.border)
+ BlockSizer.Add(self.BlockSpinBox, flag = wx.EXPAND | wx.ALIGN_CENTER_VERTICAL | wx.ALL, border = parent.border)
+ self.KrigingSizer.Add(BlockSizer, flag = wx.EXPAND | wx.ALIGN_CENTER_VERTICAL | wx.ALL, border = parent.border)
+
+ self.Sizer = wx.BoxSizer(wx.VERTICAL)
+ self.Sizer.Add(self.VariogramSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
+ self.Sizer.Add(self.KrigingSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
+
+ def HideBlockOptions(self, event):
+ self.BlockSpinBox.Enable(event.GetInt() == 1)
+
+ def OnPlotButton(self,event):
+ """ Plots variogram with current options. """
+ pass
+
+ def UseValue(self, event):
+ """ Enables/Disables the SpinCtrl in respect of the checkbox. """
+ n = self.ParametersList[event.GetId()]
+ getattr(self, n+"Ctrl").Enable(event.IsChecked())
+
+class RBookgstatPanel(RBookPanel):
+ """ Subclass of RBookPanel, with specific gstat options and kriging functions. """
+ def __init__(self, parent, Rinstance, controller, *args, **kwargs):
+ RBookPanel.__init__(self, parent, *args, **kwargs)
+
+ # assigns Rinstance, that comes from the GUI call of v.krige.py.
+ robjects = Rinstance
+ self.controller = controller
+
+ if robjects.r.require('automap')[0]:
+ self.VariogramCheckBox = wx.CheckBox(self, id = wx.ID_ANY, label = _("Auto-fit variogram"))
+ self.LeftSizer.Insert(0,
+ self.VariogramCheckBox,
+ proportion = 0,
+ flag = wx.EXPAND | wx.ALIGN_CENTER_VERTICAL | wx.ALL,
+ border = 4)
+ self.SetSizerAndFit(self.Sizer)
+ self.VariogramCheckBox.Bind(wx.EVT_CHECKBOX, self.HideOptions)
+ self.VariogramCheckBox.SetValue(state = True) # check it by default
+
+ ModelFactor = robjects.r.vgm().rx('long')
+ ModelList = robjects.r.levels(ModelFactor[0])
+ #@FIXME: no other way to let the Python pick it up..
+ # and this is te wrong place where to load this list. should be at the very beginning.
+ self.ModelChoicebox = wx.Choice(self, id = wx.ID_ANY, choices = ModelList)
+
+ # disable model parameters' widgets by default
+ for n in ["Sill", "Nugget", "Range"]:
+ getattr(self, n+"Ctrl").Enable(False)
+ self.ModelChoicebox.Enable(False)
+
+ VariogramSubSizer = wx.BoxSizer(wx.HORIZONTAL)
+ VariogramSubSizer.Add(item = wx.StaticText(self,
+ id = wx.ID_ANY,
+ label = _("Model: ")),
+ flag = wx.ALIGN_CENTER_VERTICAL | wx.ALL,
+ border = 4)
+ VariogramSubSizer.Add(item = self.ModelChoicebox,
+ flag = wx.ALIGN_CENTER_VERTICAL | wx.ALL,
+ border = 4)
+
+ self.LeftSizer.Insert(2, item = VariogramSubSizer)
+
+ self.SetSizerAndFit(self.Sizer)
+
+ def HideOptions(self, event):
+ self.ModelChoicebox.Enable(not event.IsChecked())
+ for n in ["Sill", "Nugget", "Range"]:
+ if not event.IsChecked():
+ getattr(self, n+"Ctrl").Enable(True)
+ getattr(self, n+ "ChextBox").SetValue(True)
+ getattr(self, n+ "ChextBox").Enable(False) # grey it out keeping it checked.. improvable
+ else:
+ getattr(self, n+"Ctrl").Enable(False)
+ getattr(self, n+ "ChextBox").SetValue(False)
+ getattr(self, n+ "ChextBox").Enable(True)
+ #@FIXME: was for n in self.ParametersSizer.GetChildren(): n.Enable(False) but doesn't work
+
+ def OnPlotButton(self,event):
+ """ Plots variogram with current options. """
+ ## BIG WARNING: smell of code duplication. Fix this asap. emminchia!
+ #controller = Controller() # sed, if needed,
+ #controller = self.controller
+ map = self.parent.InputDataMap.GetValue()
+ column = self.parent.InputDataColumn.GetValue()
+
+ # import data or pick them up
+ if self.controller.InputData is None:
+ self.controller.InputData = self.controller.ImportMap(map = map,
+ column = column)
+ # fit the variogram or pick it up
+ #~ Formula = self.controller.ComposeFormula(column = column,
+ #~ isblock = self.KrigingRadioBox.GetStringSelection() == "Block kriging")
+ if hasattr(self, 'VariogramCheckBox') and self.VariogramCheckBox.IsChecked():
+ self.model = ''
+ for each in ("Sill","Nugget","Range"):
+ if getattr(self, each+'ChextBox').IsChecked():
+ setattr(self, each.lower(), getattr(self, each+"Ctrl").GetValue())
+ else:
+ setattr(self, each.lower(), robjects.r('''NA'''))
+ else:
+ self.model = self.ModelChoicebox.GetStringSelection().split(" ")[0]
+ for each in ("Sill","Nugget","Range"):
+ if getattr(self, each+'ChextBox').IsChecked(): #@FIXME will be removed when chextboxes will be frozen
+ setattr(self, each.lower(), getattr(self, each+"Ctrl").GetValue())
+
+ isblock = self.KrigingRadioBox.GetStringSelection() == "Block kriging"
+ if isblock is not '':
+ self.predictor = 'x+y'
+ else:
+ self.predictor = '1'
+
+ self.controller.Variogram = self.controller.FitVariogram(robjects.Formula(str(column) + "~" + self.predictor),
+ self.controller.InputData,
+ model = self.model,
+ sill = self.sill,
+ nugget = self.nugget,
+ range = self.range)
+
+ # use R plot function, in a separate window.
+ thread.start_new_thread(self.plot, ())
+
+ def plot(self):
+ #robjects.r.X11()
+ #robjects.r.png("variogram.png")
+ textplot = robjects.r.plot(self.controller.Variogram['datavariogram'],
+ self.controller.Variogram['variogrammodel'])
+ print textplot
+ self.refresh()
+ #robjects.r['dev.off']()
+
+ def refresh(self):
+ while True:
+ rinterface.process_revents()
+ time.sleep(0.2)
+
+class RBookgeoRPanel(RBookPanel):
+ """ Subclass of RBookPanel, with specific geoR options and kriging functions. """
+ def __init__(self, parent, *args, **kwargs):
+ RBookPanel.__init__(self, parent, *args, **kwargs)
+ #@TODO: change these two lines as soon as geoR f(x)s are integrated.
+ for n in self.GetChildren():
+ n.Hide()
+ self.Sizer.Add(wx.StaticText(self, id = wx.ID_ANY, label = _("Work in progress! No functionality provided.")))
+ self.SetSizerAndFit(self.Sizer)
Deleted: grass/trunk/gui/wxpython/scripts/vkrige.py
===================================================================
--- grass/trunk/gui/wxpython/scripts/vkrige.py 2014-05-04 10:04:06 UTC (rev 60065)
+++ grass/trunk/gui/wxpython/scripts/vkrige.py 2014-05-04 10:09:52 UTC (rev 60066)
@@ -1,511 +0,0 @@
-"""
-MODULE: vkrige
-
-AUTHOR(S): Anne Ghisla <a.ghisla AT gmail.com>
-
-PURPOSE: Dedicated GUI for v.krige script.
-
-DEPENDS: R 2.x, packages gstat, maptools and spgrass6, optional: automap
-
-COPYRIGHT: (C) 2009 by the GRASS Development Team
-
-This program is free software under the GNU General Public
-License (>=v2). Read the file COPYING that comes with GRASS
-for details.
-"""
-
-#@TODO move here imports related to wxGUI
-
-### generic imports
-import os, sys
-from tempfile import gettempdir
-import time
-import thread
-from core.utils import _
-
-### dependencies to be checked once, as they are quite
-### time-consuming. cfr. grass.parser.
-
-try:
- import grass.script as grass
-except ImportError:
- sys.exit(_("No GRASS-python library found."))
-
-from core import globalvar
-from gui_core import gselect
-from core import gconsole
-from gui_core import goutput
-from core.settings import UserSettings
-from gui_core.widgets import GNotebook
-from core.giface import Notification
-#import help
-
-import wx
-#import wx.lib.plot as plot # for plotting the variogram.
-import rpy2.robjects as robjects
-import rpy2.rinterface as rinterface
-
-# global variables
-maxint = 1e6 # instead of sys.maxint, not working with SpinCtrl on 64bit [reported by Bob Moskovitz]
-
-#@TODO move away functions not regarding the GUI
-
-class KrigingPanel(wx.Panel):
- """ Main panel. Contains all widgets except Menus and Statusbar. """
- def __init__(self, parent, Rinstance, controller, *args, **kwargs):
- wx.Panel.__init__(self, parent, *args, **kwargs)
-
- self.parent = parent
- self.border = 4
-
- # 1. Input data
- InputBoxSizer = wx.StaticBoxSizer(wx.StaticBox(self, id = wx.ID_ANY, label = _("Input Data")),
- orient = wx.HORIZONTAL)
-
- flexSizer = wx.FlexGridSizer(cols = 3, hgap = 5, vgap = 5)
- flexSizer.AddGrowableCol(1)
-
- flexSizer.Add(item = wx.StaticText(self, id = wx.ID_ANY, label = _("Point dataset:")),
- flag = wx.ALIGN_CENTER_VERTICAL)
- self.InputDataMap = gselect.VectorSelect(parent = self,
- ftype = 'points',
- updateOnPopup = False)
- self.InputDataMap.SetFocus()
- flexSizer.Add(item = self.InputDataMap, flag = wx.ALIGN_CENTER_VERTICAL)
-
- RefreshButton = wx.Button(self, id = wx.ID_REFRESH)
- RefreshButton.Bind(wx.EVT_BUTTON, self.OnButtonRefresh)
- flexSizer.Add(item = RefreshButton, flag = wx.ALIGN_CENTER_VERTICAL)
-
- flexSizer.Add(item = wx.StaticText(self, id = wx.ID_ANY, label = _("Numeric column:")),
- flag = wx.ALIGN_CENTER_VERTICAL)
- self.InputDataColumn = gselect.ColumnSelect(self, id = wx.ID_ANY)
- flexSizer.Add(item = self.InputDataColumn)
-
- self.InputDataMap.GetChildren()[0].Bind(wx.EVT_TEXT, self.OnInputMapChanged)
- self.InputDataColumn.GetChildren()[0].Bind(wx.EVT_TEXT, self.OnInputColumnChanged)
-
- InputBoxSizer.Add(item = flexSizer)
-
- # 2. Kriging. In book pages one for each R package. Includes variogram fit.
- KrigingSizer = wx.StaticBoxSizer(wx.StaticBox(self, id = wx.ID_ANY, label = _("Kriging")), wx.HORIZONTAL)
-
- self.RPackagesBook = GNotebook(parent = self, style = globalvar.FNPageDStyle)
-
- for Rpackage in ["gstat"]: # , "geoR"]: #@TODO: enable it if/when it'll be implemented.
- self.CreatePage(package = Rpackage, Rinstance = Rinstance, controller = controller)
-
- ## Command output. From menuform module, cmdPanel class
- self._gconsole = gconsole.GConsole(guiparent = self)
- self.goutput = goutput.GConsoleWindow(parent = self, gconsole = self._gconsole, margin = False)
- self.goutputId = self.RPackagesBook.GetPageCount()
- self.outpage = self.RPackagesBook.AddPage(page = self.goutput, text = _("Command output"), name = 'output')
- self._gconsole.Bind(gconsole.EVT_CMD_RUN,
- lambda event:
- self._switchPageHandler(event=event, notification=Notification.MAKE_VISIBLE))
- self._gconsole.Bind(gconsole.EVT_CMD_DONE,
- lambda event:
- self._switchPageHandler(event=event, notification=Notification.RAISE_WINDOW))
- self.RPackagesBook.SetSelection(0)
- KrigingSizer.Add(self.RPackagesBook, proportion = 1, flag = wx.EXPAND)
-
- # 3. Output Parameters.
- OutputSizer = wx.StaticBoxSizer(wx.StaticBox(self, id = wx.ID_ANY, label = _("Output")), wx.HORIZONTAL)
-
- OutputParameters = wx.GridBagSizer(hgap = 5, vgap = 5)
- OutputParameters.Add(item = wx.StaticText(self, id = wx.ID_ANY, label = _("Name for the output raster map:")),
- flag = wx.ALIGN_CENTER_VERTICAL,
- pos = (0, 0))
- self.OutputMapName = gselect.Select(parent = self, id = wx.ID_ANY,
- type = 'raster',
- mapsets = [grass.gisenv()['MAPSET']])
- OutputParameters.Add(item = self.OutputMapName, flag = wx.EXPAND | wx.ALL,
- pos = (0, 1))
- self.VarianceRasterCheckbox = wx.CheckBox(self, id = wx.ID_ANY, label = _("Export variance map as well: "))
- self.VarianceRasterCheckbox.SetValue(state = True)
- OutputParameters.Add(item = self.VarianceRasterCheckbox,
- flag = wx.ALIGN_CENTER_VERTICAL,
- pos = (1, 0))
- self.OutputVarianceMapName = gselect.Select(parent = self, id = wx.ID_ANY,
- type = 'raster',
- mapsets = [grass.gisenv()['MAPSET']])
- self.VarianceRasterCheckbox.Bind(wx.EVT_CHECKBOX, self.OnVarianceCBChecked)
- OutputParameters.Add(item = self.OutputVarianceMapName, flag = wx.EXPAND | wx.ALL,
- pos = (1, 1))
-
- self.OverwriteCheckBox = wx.CheckBox(self, id = wx.ID_ANY,
- label = _("Allow output files to overwrite existing files"))
- self.OverwriteCheckBox.SetValue(UserSettings.Get(group='cmd', key='overwrite', subkey='enabled'))
- OutputParameters.Add(item = self.OverwriteCheckBox,
- pos = (2, 0), span = (1, 2))
-
- OutputParameters.AddGrowableCol(1)
- OutputSizer.Add(OutputParameters, proportion = 0, flag = wx.EXPAND | wx.ALL, border = self.border)
-
- # 4. Run Button and Quit Button
- ButtonSizer = wx.BoxSizer(wx.HORIZONTAL)
- HelpButton = wx.Button(self, id = wx.ID_HELP)
- HelpButton.Bind(wx.EVT_BUTTON, self.OnHelpButton)
- QuitButton = wx.Button(self, id = wx.ID_EXIT)
- QuitButton.Bind(wx.EVT_BUTTON, self.OnCloseWindow)
- self.RunButton = wx.Button(self, id = wx.ID_ANY, label = _("&Run")) # no stock ID for Run button..
- self.RunButton.Bind(wx.EVT_BUTTON, self.OnRunButton)
- self.RunButton.Enable(False) # disable it on loading the interface, as input map is not set
- ButtonSizer.Add(HelpButton, proportion = 0, flag = wx.ALIGN_LEFT | wx.ALL, border = self.border)
- ButtonSizer.Add(QuitButton, proportion = 0, flag = wx.ALIGN_RIGHT | wx.ALL, border = self.border)
- ButtonSizer.Add(self.RunButton, proportion = 0, flag = wx.ALIGN_RIGHT | wx.ALL, border = self.border)
-
- # Main Sizer. Add each child sizer as soon as it is ready.
- Sizer = wx.BoxSizer(wx.VERTICAL)
- Sizer.Add(InputBoxSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = self.border)
- Sizer.Add(KrigingSizer, proportion = 1, flag = wx.EXPAND | wx.ALL, border = self.border)
- Sizer.Add(OutputSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = self.border)
- Sizer.Add(ButtonSizer, proportion = 0, flag = wx.ALIGN_RIGHT | wx.ALL, border = self.border)
- self.SetSizerAndFit(Sizer)
-
- # last action of __init__: update imput data list.
- # it's performed in the few seconds gap while user examines interface before clicking anything.
- #@TODO: implement a splashcreen IF the maps cause a noticeable lag [markus' suggestion]
- self.InputDataMap.GetElementList()
-
- def CreatePage(self, package, Rinstance, controller):
- """ Creates the three notebook pages, one for each R package """
- for package in ["gstat"]: #@TODO add here other packages when they will be implemented
- classobj = eval("RBook"+package+"Panel")
- setattr(self, "RBook"+package+"Panel", (classobj(self,
- id = wx.ID_ANY,
- Rinstance = Rinstance,
- controller = controller)))
- self.RPackagesBook.AddPage(page = getattr(self, "RBook"+package+"Panel"), text = package)
-
- def OnButtonRefresh(self, event):
- """ Forces refresh of list of available layers. """
- self.InputDataMap.GetElementList()
-
- def OnCloseWindow(self, event):
- """ Cancel button pressed"""
- self.parent.Close()
- event.Skip()
-
- def OnHelpButton(self, event):
- grass.run_command('g.manual', entry = 'v.krige')
- event.Skip()
-
- def OnInputMapChanged(self, event):
- """ Refreshes list of columns."""
- MapName = event.GetString()
- self.InputDataColumn.InsertColumns(vector = MapName,
- layer = 1, excludeKey = False,
- type = ['integer', 'double precision'])
-
- def OnInputColumnChanged(self, event):
- """Fills output map name TextCtrl """
- MapName = self.InputDataMap.GetValue()
- enable = bool(self.InputDataColumn.GetValue())
- self.RunButton.Enable(enable)
- self.RBookgstatPanel.PlotButton.Enable(enable)
-
- if enable:
- self.OutputMapName.SetValue(MapName.split("@")[0]+"_kriging")
- self.OutputVarianceMapName.SetValue(MapName.split("@")[0]+"_kriging.var")
- else:
- self.OutputMapName.SetValue('')
- self.OutputVarianceMapName.SetValue('')
-
- def OnRunButton(self,event):
- """ Execute R analysis. """
- #@FIXME: send data to main method instead of running it here.
-
- #-1: get the selected notebook page. The user shall know that [s]he can modify settings in all
- # pages, but only the selected one will be executed when Run is pressed.
- SelectedPanel = self.RPackagesBook.GetCurrentPage()
-
- if self.RPackagesBook.GetPageText(self.RPackagesBook.GetSelection()) == 'Command output':
- self._gconsole.WriteError("No parameters for running. Please select \"gstat\" tab, check parameters and re-run.")
- return False # no break invoked by above function
-
- # mount command string as it would have been written on CLI
- command = ["v.krige", "input=" + self.InputDataMap.GetValue(),
- "column=" + self.InputDataColumn.GetValue(),
- "output=" + self.OutputMapName.GetValue(),
- "package=" + '%s' % self.RPackagesBook.GetPageText(self.RPackagesBook.GetSelection())]
-
- if not hasattr(SelectedPanel, 'VariogramCheckBox') or not SelectedPanel.VariogramCheckBox.IsChecked():
- command.append("model=" + '%s' % SelectedPanel.ModelChoicebox.GetStringSelection().split(" ")[0])
-
- for i in ['Sill', 'Nugget', 'Range']:
- if getattr(SelectedPanel, i+"ChextBox").IsChecked():
- command.append(i.lower() + "=" + '%s' % getattr(SelectedPanel, i+'Ctrl').GetValue())
-
- if SelectedPanel.KrigingRadioBox.GetStringSelection() == "Block kriging":
- command.append("block=" + '%s' % SelectedPanel.BlockSpinBox.GetValue())
- if self.OverwriteCheckBox.IsChecked():
- command.append("--overwrite")
- if self.VarianceRasterCheckbox.IsChecked():
- command.append("output_var=" + self.OutputVarianceMapName.GetValue())
-
- # give it to the output console
- #@FIXME: it runs the command as a NEW instance. Reimports data, recalculates variogram fit..
- #otherwise I can use Controller() and mimic RunCmd behaviour.
- self._gconsole.RunCmd(command)
-
- def OnVarianceCBChecked(self, event):
- self.OutputVarianceMapName.Enable(event.IsChecked())
-
- def _switchPageHandler(self, event, notification):
- self._switchPage(notification=notification)
- event.Skip()
-
- def _switchPage(self, notification):
- """!Manages @c 'output' notebook page according to event notification."""
- if notification == Notification.HIGHLIGHT:
- self.RPackagesBook.HighlightPageByName('output')
- if notification == Notification.MAKE_VISIBLE:
- self.RPackagesBook.SetSelectionByName('output')
- if notification == Notification.RAISE_WINDOW:
- self.RPackagesBook.SetSelectionByName('output')
- self.SetFocus()
- self.Raise()
-
-
-class KrigingModule(wx.Frame):
- """ Kriging module for GRASS GIS. Depends on R and its packages gstat and geoR. """
- def __init__(self, parent, Rinstance, controller, *args, **kwargs):
- wx.Frame.__init__(self, parent, *args, **kwargs)
- # setting properties and all widgettery
- self.SetTitle(_("Kriging Module"))
- self.SetIcon(wx.Icon(os.path.join(globalvar.ICONDIR, 'grass_dialog.ico'), wx.BITMAP_TYPE_ICO))
- self.log = Log(self)
- self.CreateStatusBar()
- self.log.message(_("Ready."))
-
- self.Panel = KrigingPanel(self, Rinstance, controller)
- self.SetMinSize(self.GetBestSize())
- self.SetSize(self.GetBestSize())
-
-class Log:
- """ The log output is redirected to the status bar of the containing frame. """
- def __init__(self, parent):
- self.parent = parent
-
- def message(self, text_string):
- """ Updates status bar """
- self.parent.SetStatusText(text_string.strip())
-
-class RBookPanel(wx.Panel):
- """ Generic notebook page with shared widgets and empty kriging functions. """
- def __init__(self, parent, *args, **kwargs):
- wx.Panel.__init__(self, parent, *args, **kwargs)
-
- self.parent = parent
-
- self.VariogramSizer = wx.StaticBoxSizer(wx.StaticBox(self,
- id = wx.ID_ANY,
- label = _("Variogram fitting")),
- wx.HORIZONTAL)
- self.LeftSizer = wx.BoxSizer(wx.VERTICAL)
- self.RightSizer = wx.BoxSizer(wx.VERTICAL)
- self.ParametersSizer = wx.GridBagSizer(vgap = 5, hgap = 5)
-
- self.VariogramSizer.Add(self.LeftSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
- self.VariogramSizer.Add(self.RightSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
-
- # left side of Variogram fitting. The checkboxes and spinctrls.
- self.PlotButton = wx.Button(self, id = wx.ID_ANY, label = _("Plot/refresh variogram")) # no stock ID for Run button..
- self.PlotButton.Bind(wx.EVT_BUTTON, self.OnPlotButton)
- self.PlotButton.Enable(False) # grey it out until a suitable layer is available
- self.LeftSizer.Add(self.PlotButton, proportion = 0, flag = wx.ALL, border = parent.border)
- self.LeftSizer.Add(self.ParametersSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
-
- self.ParametersList = ["Sill", "Nugget", "Range"]
- MinValues = [0,0,1]
- for n in self.ParametersList:
- setattr(self, n+"ChextBox", wx.CheckBox(self,
- id = self.ParametersList.index(n),
- label = _(n + ":")))
- setattr(self, n+"Ctrl", (wx.SpinCtrl(self,
- id = wx.ID_ANY,
- min = MinValues[self.ParametersList.index(n)],
- max = maxint)))
- getattr(self, n+"ChextBox").Bind(wx.EVT_CHECKBOX,
- self.UseValue,
- id = self.ParametersList.index(n))
- setattr(self, n+"Sizer", (wx.BoxSizer(wx.HORIZONTAL)))
- self.ParametersSizer.Add(getattr(self, n+"ChextBox"),
- flag = wx.ALIGN_CENTER_VERTICAL,
- pos = (self.ParametersList.index(n),0))
- self.ParametersSizer.Add(getattr(self, n+"Ctrl"),
- flag = wx.EXPAND | wx.ALIGN_CENTER_VERTICAL,
- pos = (self.ParametersList.index(n),1))
-
- # right side of the Variogram fitting. The plot area.
- #Plot = wx.StaticText(self, id= wx.ID_ANY, label = "Check Plot Variogram to interactively fit model.")
- #PlotPanel = wx.Panel(self)
- #self.PlotArea = plot.PlotCanvas(PlotPanel)
- #self.PlotArea.SetInitialSize(size = (250,250))
- #self.RightSizer.Add(PlotPanel, proportion=0, flag= wx.EXPAND|wx.ALL, border=parent.border)
-
- self.KrigingSizer = wx.StaticBoxSizer(wx.StaticBox(self,
- id = wx.ID_ANY,
- label = _("Kriging techniques")),
- wx.VERTICAL)
-
- KrigingList = ["Ordinary kriging", "Block kriging"]#, "Universal kriging"] #@FIXME: i18n on the list?
- self.KrigingRadioBox = wx.RadioBox(self,
- id = wx.ID_ANY,
- choices = KrigingList,
- majorDimension = 1,
- style = wx.RA_SPECIFY_COLS)
- self.KrigingRadioBox.Bind(wx.EVT_RADIOBOX, self.HideBlockOptions)
- self.KrigingSizer.Add(self.KrigingRadioBox, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
-
- # block kriging parameters. Size.
- BlockSizer = wx.BoxSizer(wx.HORIZONTAL)
- BlockLabel = wx.StaticText(self, id = wx.ID_ANY, label = _("Block size:"))
- self.BlockSpinBox = wx.SpinCtrl(self, id = wx.ID_ANY, min = 1, max = maxint)
- self.BlockSpinBox.Enable(False) # default choice is Ordinary kriging so block param is disabled
- BlockSizer.Add(BlockLabel, flag = wx.ALIGN_CENTER_VERTICAL | wx.ALL, border = parent.border)
- BlockSizer.Add(self.BlockSpinBox, flag = wx.EXPAND | wx.ALIGN_CENTER_VERTICAL | wx.ALL, border = parent.border)
- self.KrigingSizer.Add(BlockSizer, flag = wx.EXPAND | wx.ALIGN_CENTER_VERTICAL | wx.ALL, border = parent.border)
-
- self.Sizer = wx.BoxSizer(wx.VERTICAL)
- self.Sizer.Add(self.VariogramSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
- self.Sizer.Add(self.KrigingSizer, proportion = 0, flag = wx.EXPAND | wx.ALL, border = parent.border)
-
- def HideBlockOptions(self, event):
- self.BlockSpinBox.Enable(event.GetInt() == 1)
-
- def OnPlotButton(self,event):
- """ Plots variogram with current options. """
- pass
-
- def UseValue(self, event):
- """ Enables/Disables the SpinCtrl in respect of the checkbox. """
- n = self.ParametersList[event.GetId()]
- getattr(self, n+"Ctrl").Enable(event.IsChecked())
-
-class RBookgstatPanel(RBookPanel):
- """ Subclass of RBookPanel, with specific gstat options and kriging functions. """
- def __init__(self, parent, Rinstance, controller, *args, **kwargs):
- RBookPanel.__init__(self, parent, *args, **kwargs)
-
- # assigns Rinstance, that comes from the GUI call of v.krige.py.
- robjects = Rinstance
- self.controller = controller
-
- if robjects.r.require('automap')[0]:
- self.VariogramCheckBox = wx.CheckBox(self, id = wx.ID_ANY, label = _("Auto-fit variogram"))
- self.LeftSizer.Insert(0,
- self.VariogramCheckBox,
- proportion = 0,
- flag = wx.EXPAND | wx.ALIGN_CENTER_VERTICAL | wx.ALL,
- border = 4)
- self.SetSizerAndFit(self.Sizer)
- self.VariogramCheckBox.Bind(wx.EVT_CHECKBOX, self.HideOptions)
- self.VariogramCheckBox.SetValue(state = True) # check it by default
-
- ModelFactor = robjects.r.vgm().rx('long')
- ModelList = robjects.r.levels(ModelFactor[0])
- #@FIXME: no other way to let the Python pick it up..
- # and this is te wrong place where to load this list. should be at the very beginning.
- self.ModelChoicebox = wx.Choice(self, id = wx.ID_ANY, choices = ModelList)
-
- # disable model parameters' widgets by default
- for n in ["Sill", "Nugget", "Range"]:
- getattr(self, n+"Ctrl").Enable(False)
- self.ModelChoicebox.Enable(False)
-
- VariogramSubSizer = wx.BoxSizer(wx.HORIZONTAL)
- VariogramSubSizer.Add(item = wx.StaticText(self,
- id = wx.ID_ANY,
- label = _("Model: ")),
- flag = wx.ALIGN_CENTER_VERTICAL | wx.ALL,
- border = 4)
- VariogramSubSizer.Add(item = self.ModelChoicebox,
- flag = wx.ALIGN_CENTER_VERTICAL | wx.ALL,
- border = 4)
-
- self.LeftSizer.Insert(2, item = VariogramSubSizer)
-
- self.SetSizerAndFit(self.Sizer)
-
- def HideOptions(self, event):
- self.ModelChoicebox.Enable(not event.IsChecked())
- for n in ["Sill", "Nugget", "Range"]:
- if not event.IsChecked():
- getattr(self, n+"Ctrl").Enable(True)
- getattr(self, n+ "ChextBox").SetValue(True)
- getattr(self, n+ "ChextBox").Enable(False) # grey it out keeping it checked.. improvable
- else:
- getattr(self, n+"Ctrl").Enable(False)
- getattr(self, n+ "ChextBox").SetValue(False)
- getattr(self, n+ "ChextBox").Enable(True)
- #@FIXME: was for n in self.ParametersSizer.GetChildren(): n.Enable(False) but doesn't work
-
- def OnPlotButton(self,event):
- """ Plots variogram with current options. """
- ## BIG WARNING: smell of code duplication. Fix this asap. emminchia!
- #controller = Controller() # sed, if needed,
- #controller = self.controller
- map = self.parent.InputDataMap.GetValue()
- column = self.parent.InputDataColumn.GetValue()
-
- # import data or pick them up
- if self.controller.InputData is None:
- self.controller.InputData = self.controller.ImportMap(map = map,
- column = column)
- # fit the variogram or pick it up
- #~ Formula = self.controller.ComposeFormula(column = column,
- #~ isblock = self.KrigingRadioBox.GetStringSelection() == "Block kriging")
- if hasattr(self, 'VariogramCheckBox') and self.VariogramCheckBox.IsChecked():
- self.model = ''
- for each in ("Sill","Nugget","Range"):
- if getattr(self, each+'ChextBox').IsChecked():
- setattr(self, each.lower(), getattr(self, each+"Ctrl").GetValue())
- else:
- setattr(self, each.lower(), robjects.r('''NA'''))
- else:
- self.model = self.ModelChoicebox.GetStringSelection().split(" ")[0]
- for each in ("Sill","Nugget","Range"):
- if getattr(self, each+'ChextBox').IsChecked(): #@FIXME will be removed when chextboxes will be frozen
- setattr(self, each.lower(), getattr(self, each+"Ctrl").GetValue())
-
- isblock = self.KrigingRadioBox.GetStringSelection() == "Block kriging"
- if isblock is not '':
- self.predictor = 'x+y'
- else:
- self.predictor = '1'
-
- self.controller.Variogram = self.controller.FitVariogram(robjects.Formula(str(column) + "~" + self.predictor),
- self.controller.InputData,
- model = self.model,
- sill = self.sill,
- nugget = self.nugget,
- range = self.range)
-
- # use R plot function, in a separate window.
- thread.start_new_thread(self.plot, ())
-
- def plot(self):
- #robjects.r.X11()
- #robjects.r.png("variogram.png")
- textplot = robjects.r.plot(self.controller.Variogram['datavariogram'],
- self.controller.Variogram['variogrammodel'])
- print textplot
- self.refresh()
- #robjects.r['dev.off']()
-
- def refresh(self):
- while True:
- rinterface.process_revents()
- time.sleep(0.2)
-
-class RBookgeoRPanel(RBookPanel):
- """ Subclass of RBookPanel, with specific geoR options and kriging functions. """
- def __init__(self, parent, *args, **kwargs):
- RBookPanel.__init__(self, parent, *args, **kwargs)
- #@TODO: change these two lines as soon as geoR f(x)s are integrated.
- for n in self.GetChildren():
- n.Hide()
- self.Sizer.Add(wx.StaticText(self, id = wx.ID_ANY, label = _("Work in progress! No functionality provided.")))
- self.SetSizerAndFit(self.Sizer)
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