[GRASS-dev] GRASS on Debian [was: Re: [GRASS-user] G7-gui and G64 add-on problems on Xubuntu (installation from grass/ubuntugis ppa)]

Markus Neteler neteler at osgeo.org
Thu Oct 31 06:28:21 PDT 2013 

On Thu, Oct 31, 2013 at 2:19 PM, Moritz Lennert
<mlennert at club.worldonline.be> wrote:
...
> A bit off-topic, but since we're discussing packaging on Debian & co:
> Hamish, do you know what is going on for grass 6.4.3 ? I see that it hasn't
> migrated to testing, yet, because of failure to build on ia64:
>
> http://release.debian.org/migration/testing.pl?package=grass
>
> Any idea what the trouble is ? In the build logs I see stuff like:
>
> Status: gcc -E      -DPACKAGE="grasslibs" -DPACKAGE="grasslibs"
> -I/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/include -U __GNUC__ -dD
> "-Dinline=" "-D__inline__=" "-D__extension__=" "-D_Bool=uint8_t"
> "-D__const=const" "-D__asm__(x)=" "-D__asm(x)=" "-DCTYPESGEN=1"
> /tmp/tmp3imMK2.h
> Status: Parsing /tmp/tmp3imMK2.h
> Error: /usr/include/GL/gl.h:109: Syntax error at '\n'
> Error: /usr/include/GL/gl.h:112: Syntax error at '\n'


This happens on all Linux platforms and is not an issue usually.

https://buildd.debian.org/status/fetch.php?pkg=grass&arch=ia64&ver=6.4.3-2&stamp=1380196645
shows

GRASS GIS compilation log
-------------------------
Started compilation: Thu Sep 26 11:30:48 UTC 2013
--
Errors in:
/«PKGBUILDDIR»/lib/display
/«PKGBUILDDIR»/lib/db/dbmi_driver
...
which is really

make[4]: Entering directory `/«PKGBUILDDIR»/lib/display'
test -d OBJ.ia64-unknown-linux-gnu || mkdir -p OBJ.ia64-unknown-linux-gnu
gcc -I/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/include  -g -O2
-Wformat -Werror=format-security  -fPIE    -D_FORTIFY_SOURCE=2
-Wformat -Wformat-security -Werror=format-security
-Wno-error=format-security -Wall -O    -fPIC
-DPACKAGE=\""grasslibs"\"    -DPACKAGE=\""grasslibs"\"
-I/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/include -o
OBJ.ia64-unknown-linux-gnu/cnversions.o -c cnversions.c
...
gcc -I/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/include  -g -O2
-Wformat -Werror=format-security  -fPIE    -D_FORTIFY_SOURCE=2
-Wformat -Wformat-security -Werror=format-security
-Wno-error=format-security -Wall -O    -fPIC
-DPACKAGE=\""grasslibs"\"    -DPACKAGE=\""grasslibs"\"
-I/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/include -o
OBJ.ia64-unknown-linux-gnu/window.o -c window.c
gcc -shared -o /«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/lib/libgrass_display.6.4.3.so
-L/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/lib -Wl,--export-dynamic
-Wl,-rpath-link,/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/lib
OBJ.ia64-unknown-linux-gnu/cnversions.o
OBJ.ia64-unknown-linux-gnu/color_list.o
OBJ.ia64-unknown-linux-gnu/draw.o OBJ.ia64-unknown-linux-gnu/draw2.o
OBJ.ia64-unknown-linux-gnu/get_win.o
OBJ.ia64-unknown-linux-gnu/ident_win.o
OBJ.ia64-unknown-linux-gnu/list.o OBJ.ia64-unknown-linux-gnu/popup.o
OBJ.ia64-unknown-linux-gnu/raster.o
OBJ.ia64-unknown-linux-gnu/raster2.o
OBJ.ia64-unknown-linux-gnu/setup.o OBJ.ia64-unknown-linux-gnu/symbol.o
OBJ.ia64-unknown-linux-gnu/tran_colr.o
OBJ.ia64-unknown-linux-gnu/window.o -lgrass_gis.6.4.3
-lgrass_datetime.6.4.3 -lz     -lgrass_raster.6.4.3
-lgrass_pngdriver.6.4.3 -lgrass_driver.6.4.3 -lgrass_gis.6.4.3
-lgrass_datetime.6.4.3 -lz     -lfreetype    -lgrass_gis.6.4.3
-lgrass_datetime.6.4.3 -lz     -lpng  -lz  -lm  -lgrass_psdriver.6.4.3
-lgrass_driver.6.4.3 -lgrass_gis.6.4.3 -lgrass_datetime.6.4.3 -lz
-lfreetype    -lgrass_gis.6.4.3 -lgrass_datetime.6.4.3 -lz
-lgrass_driver.6.4.3 -lgrass_gis.6.4.3 -lgrass_datetime.6.4.3 -lz
-lfreetype    -lgrass_gis.6.4.3 -lgrass_datetime.6.4.3 -lz
/usr/bin/ld: OBJ.ia64-unknown-linux-gnu/raster2.o: @gprel relocation
against dynamic symbol D__overlay_mode
/usr/bin/ld: final link failed: Nonrepresentable section on output
collect2: ld returned 1 exit status
make[4]: *** [/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/lib/libgrass_display.6.4.3.so]
Error 1
make[4]: Leaving directory `/«PKGBUILDDIR»/lib/display'

and so on
...

gcc -I/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/include  -g -O2
-Wformat -Werror=format-security  -fPIE    -D_FORTIFY_SOURCE=2
-Wformat -Wformat-security -Werror=format-security
-Wno-error=format-security -Wall -O    -fPIC
-DPACKAGE=\""grasslibs"\"   -I../dbmi_base   -DPACKAGE=\""grasslibs"\"
 -I/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/include -o
OBJ.ia64-unknown-linux-gnu/driver_state.o -c driver_state.c
gcc -shared -o /«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/lib/libgrass_dbmidriver.6.4.3.so
-L/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/lib -Wl,--export-dynamic
-Wl,-rpath-link,/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/lib
OBJ.ia64-unknown-linux-gnu/d_add_col.o
OBJ.ia64-unknown-linux-gnu/d_bindupdate.o
OBJ.ia64-unknown-linux-gnu/d_close_cur.o
OBJ.ia64-unknown-linux-gnu/d_closedb.o
OBJ.ia64-unknown-linux-gnu/d_create_idx.o
OBJ.ia64-unknown-linux-gnu/d_create_tab.o
OBJ.ia64-unknown-linux-gnu/d_createdb.o
OBJ.ia64-unknown-linux-gnu/d_delete.o
OBJ.ia64-unknown-linux-gnu/d_deletedb.o
OBJ.ia64-unknown-linux-gnu/d_desc_table.o
OBJ.ia64-unknown-linux-gnu/d_drop_col.o
OBJ.ia64-unknown-linux-gnu/d_drop_index.o
OBJ.ia64-unknown-linux-gnu/d_drop_tab.o
OBJ.ia64-unknown-linux-gnu/d_execute.o
OBJ.ia64-unknown-linux-gnu/d_fetch.o
OBJ.ia64-unknown-linux-gnu/d_finddb.o
OBJ.ia64-unknown-linux-gnu/d_insert.o
OBJ.ia64-unknown-linux-gnu/d_list_idx.o
OBJ.ia64-unknown-linux-gnu/d_list_tabs.o
OBJ.ia64-unknown-linux-gnu/d_listdb.o
OBJ.ia64-unknown-linux-gnu/d_mkdir.o
OBJ.ia64-unknown-linux-gnu/d_opendb.o
OBJ.ia64-unknown-linux-gnu/d_openinsert.o
OBJ.ia64-unknown-linux-gnu/d_openselect.o
OBJ.ia64-unknown-linux-gnu/d_openupdate.o
OBJ.ia64-unknown-linux-gnu/d_priv.o
OBJ.ia64-unknown-linux-gnu/d_rows.o
OBJ.ia64-unknown-linux-gnu/d_update.o
OBJ.ia64-unknown-linux-gnu/d_version.o
OBJ.ia64-unknown-linux-gnu/driver.o
OBJ.ia64-unknown-linux-gnu/driver_state.o -lgrass_dbmibase.6.4.3
-lgrass_gis.6.4.3 -lgrass_datetime.6.4.3 -lz
-lgrass_dbstubs.6.4.3 -lgrass_dbmibase.6.4.3 -lgrass_gis.6.4.3
-lgrass_datetime.6.4.3 -lz      -lgrass_gis.6.4.3
-lgrass_datetime.6.4.3 -lz      -lgrass_gis.6.4.3
-lgrass_datetime.6.4.3 -lz
/usr/bin/ld: OBJ.ia64-unknown-linux-gnu/driver.o: @gprel relocation
against dynamic symbol db_driver_init
/usr/bin/ld: OBJ.ia64-unknown-linux-gnu/driver.o: @gprel relocation
against dynamic symbol db_driver_finish
/usr/bin/ld: final link failed: Nonrepresentable section on output
collect2: ld returned 1 exit status
make[5]: *** [/«PKGBUILDDIR»/dist.ia64-unknown-linux-gnu/lib/libgrass_dbmidriver.6.4.3.so]
Error 1

...

In an old thread here there is a suggestion:
http://software.intel.com/en-us/forums/topic/267748
"On Itanium-based systems running Linux, when the -shared switch is
used to create a Dynamic Shared Object (.so), there may be some
relocation against dynamic symbol" messages generated during the ld
phase
...

To fix this problem, add the switches -i_dynamic and -nofor_main to
the command line.
"

see also
http://www.opendx.org/cgi-bin/forum/YaBB.pl?num=1139610671/1

A Debian geek may know...

Markus

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