Does that require compiling with OpenMP?<div>Doug<br><br><div class="gmail_quote">On Tue, Mar 26, 2013 at 1:27 PM, Michael Barton <span dir="ltr"><<a href="mailto:Michael.Barton@asu.edu" target="_blank">Michael.Barton@asu.edu</a>></span> wrote:<br>
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i.pan.sharpen contains python code to do an inverse pca. It uses some of the new r.mapcalc capabilities to do parallel processing on multi-core processors. So it's pretty fast.
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<div>____________________</div>
<div>C. Michael Barton</div>
<div>Director, Center for Social Dynamics & Complexity </div>
<div>Professor of Anthropology, School of Human Evolution & Social Change</div>
<div>Arizona State University</div>
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voice: <span style="white-space:pre-wrap"> </span>480-965-6262 (SHESC), 480-727-9746 (CSDC)<br>
fax: 480-965-7671 (SHESC), 480-727-0709 (CSDC)<br>
<div>www: <a href="http://www.public.asu.edu/~cmbarton" target="_blank">http://www.public.asu.edu/~cmbarton</a>,
<a href="http://csdc.asu.edu" target="_blank">http://csdc.asu.edu</a></div>
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<div>On Mar 26, 2013, at 4:24 AM, <<a href="mailto:grass-dev-request@lists.osgeo.org" target="_blank">grass-dev-request@lists.osgeo.org</a>></div>
<div> wrote:</div>
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<span style="font-family:Helvetica;font-size:medium;color:rgb(127,127,127)"><b>From:<span> </span></b></span><span style="font-family:Helvetica;font-size:medium">Martin Landa <<a href="mailto:landa.martin@gmail.com" target="_blank">landa.martin@gmail.com</a>><br>
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<span style="font-family:Helvetica;font-size:medium;color:rgb(127,127,127)"><b>Subject:<span> </span></b></span><span style="font-family:Helvetica;font-size:medium"><b>[GRASS-dev] calculating inverse matrix</b><br>
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<span style="font-family:Helvetica;font-size:medium;color:rgb(127,127,127)"><b>Date:<span> </span></b></span><span style="font-family:Helvetica;font-size:medium">March 26, 2013 4:20:08 AM MST<br>
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<span style="font-family:Helvetica;font-size:medium;color:rgb(127,127,127)"><b>To:<span> </span></b></span><span style="font-family:Helvetica;font-size:medium">GRASS developers list <<a href="mailto:grass-dev@lists.osgeo.org" target="_blank">grass-dev@lists.osgeo.org</a>><br>
</span></div><div class="im">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">Hi
all,</span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">I
found several methods in GRASS code which compute inverse matrix</span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
</div><div class="im"><span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">1)
v.generalize</span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<a href="http://trac.osgeo.org/grass/browser/grass/trunk/vector/v.generalize/matrix.c#L134" style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px" target="_blank">http://trac.osgeo.org/grass/browser/grass/trunk/vector/v.generalize/matrix.c#L134</a><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">2)
i.orto.photo</span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<a href="http://trac.osgeo.org/grass/browser/grass/trunk/imagery/i.ortho.photo/lib/m_inverse.c#L16" style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px" target="_blank">http://trac.osgeo.org/grass/browser/grass/trunk/imagery/i.ortho.photo/lib/m_inverse.c#L16</a><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">3)
GMath lib (depends on lapack/blas)</span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<a href="http://trac.osgeo.org/grass/browser/grass/trunk/lib/gmath/la.c#L566" style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px" target="_blank">http://trac.osgeo.org/grass/browser/grass/trunk/lib/gmath/la.c#L566</a><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">It
would be nice to consolidate it including data structures (modules</span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">noted
above define their own data structures for matrix). In other</span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">worlds
to incorporate v.generalize/i.orto.photo code into GMath lib.</span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">Any
pointers here?</span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">Thanks,
Martin</span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
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<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">--<span> </span></span><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
<span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">Martin
Landa <landa.martin<span> </span></span><a href="http://gmail.com/" style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px" target="_blank">gmail.com</a><span style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;display:inline!important;float:none">>
*<span> </span></span><a href="http://geo.fsv.cvut.cz/~landa" style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px" target="_blank">http://geo.fsv.cvut.cz/~landa</a><br style="font-family:Helvetica;font-size:medium;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px">
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<a href="http://lists.osgeo.org/mailman/listinfo/grass-dev" target="_blank">http://lists.osgeo.org/mailman/listinfo/grass-dev</a><br></blockquote></div><br><br clear="all"><div><br></div>-- <br><div>Doug Newcomb</div><div>
USFWS</div><div>Raleigh, NC</div><div>919-856-4520 ext. 14 <a href="mailto:doug_newcomb@fws.gov" target="_blank">doug_newcomb@fws.gov</a></div><div>---------------------------------------------------------------------------------------------------------</div>
<div>The opinions I express are my own and are not representative of the official policy of the U.S.Fish and Wildlife Service or Dept. of the Interior. Life is too short for undocumented, proprietary data formats.</div>
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