[GRASS-user] installing addon problem for regular users (ubuntu
newbies)
M S
mseibel at gmail.com
Thu Nov 12 11:08:34 EST 2009
Excellent. Seems to be working ok. I just ran the same command "sudo
make MODULE_TOPDIR=/usr/lib/grass64 ARCH_DIST=/usr/lib/grass64" for
the r.inund.fluv and it ran without error.
Thanks for the help. Most excellent!
Mark
On Thu, Nov 12, 2009 at 11:00 AM, M S <mseibel at gmail.com> wrote:
> Thanks Glynn. I failed to mention the GRASS 6.4RC5 is from UbuntuGIS
> with binaries and grass-dev package installed.
>
> It seemed to have worked (?) with errors, or I've been mucking around
> too much and missed some detail from prior trial. Seems to have
> error'd while making the manpages. I can launch r.stream.extract, and
> it runs the module. (Nice!). Here is the input/output (should long
> outputs like this go to pastebin or the like?):
>
> $ sudo make MODULE_TOPDIR=/usr/lib/grass64 ARCH_DISTDIR=/usr/lib/grass64
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/close.o -c close.c
>
> close.c: In function ‘close_streamvect’:
> close.c:33: warning: format not a string literal and no format arguments
> close.c:155: warning: format not a string literal and no format arguments
> close.c:187: warning: format not a string literal and no format arguments
> close.c:213: warning: format not a string literal and no format arguments
> close.c:221: warning: format not a string literal and no format arguments
> close.c: In function ‘close_maps’:
> close.c:245: warning: format not a string literal and no format arguments
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/del_streams.o -c del_streams.c
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/do_astar.o -c do_astar.c
> do_astar.c: In function ‘do_astar’:
> do_astar.c:33: warning: format not a string literal and no format
> arguments
> do_astar.c: In function ‘heap_add’:
> do_astar.c:154: warning: format not a string literal and no format
> arguments
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/flag_clr_all.o -c flag_clr_all.c
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/flag_create.o -c flag_create.c
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/flag_destroy.o -c flag_destroy.c
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/flag_get.o -c flag_get.c
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/flag_set.o -c flag_set.c
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/flag_unset.o -c flag_unset.c
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/load.o -c load.c
> load.c: In function ‘load_maps’:
> load.c:44: warning: format not a string literal and no format
> arguments
> load.c:46: warning: format not a string literal and no format
> arguments
> load.c:56: warning: format not a string literal and no format
> arguments
> load.c:65: warning: format not a string literal and no format
> arguments
> load.c:75: warning: format not a string literal and no format
> arguments
> load.c:217: warning: format not a string literal and no format
> arguments
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/main.o -c main.c
> main.c: In function ‘main’:
> main.c:195: warning: format not a string literal and no format
> arguments
> main.c:246: warning: format not a string literal and no format
> arguments
> main.c:254: warning: format not a string literal and no format
> arguments
> main.c:259: warning: format not a string literal and no format
> arguments
> main.c:267: warning: format not a string literal and no format
> arguments
> main.c:276: warning: format not a string literal and no format
> arguments
> main.c:281: warning: format not a string literal and no format
> arguments
> main.c:287: warning: format not a string literal and no format
> arguments
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/rbtree.o -c rbtree.c
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/streams.o -c streams.c
> streams.c: In function ‘do_accum’:
> streams.c:234: warning: format not a string literal and no format
> arguments
> streams.c: In function ‘extract_streams’:
> streams.c:460: warning: format not a string literal and no format
> arguments
> gcc -I/usr/lib/grass64/include -Wall -g -O -I/usr/include/gdal
> -DPACKAGE=\""grassmods"\" -I/usr/lib/grass64/include -o
> OBJ.i486-pc-linux-gnu/thin.o -c thin.c
> thin.c: In function ‘thin_streams’:
> thin.c:92: warning: format not a string literal and no format
> arguments
> gcc -L/usr/lib/grass64/lib -Wl,-Bsymbolic-functions
> -Wl,--export-dynamic -Wl,-rpath-link,/usr/lib/grass64/lib -o
> /usr/lib/grass64/bin/r.stream.extract OBJ.i486-pc-linux-gnu/close.o
> OBJ.i486-pc-linux-gnu/del_streams.o OBJ.i486-pc-linux-gnu/do_astar.o
> OBJ.i486-pc-linux-gnu/flag_clr_all.o
> OBJ.i486-pc-linux-gnu/flag_create.o
> OBJ.i486-pc-linux-gnu/flag_destroy.o OBJ.i486-pc-linux-gnu/flag_get.o
> OBJ.i486-pc-linux-gnu/flag_set.o OBJ.i486-pc-linux-gnu/flag_unset.o
> OBJ.i486-pc-linux-gnu/load.o OBJ.i486-pc-linux-gnu/main.o
> OBJ.i486-pc-linux-gnu/rbtree.o OBJ.i486-pc-linux-gnu/streams.o
> OBJ.i486-pc-linux-gnu/thin.o -lgrass_vect -lgrass_dbmibase
> -lgrass_gis -lgrass_datetime -lz -lgrass_dbmiclient
> -lgrass_dbmibase -lgrass_gis -lgrass_datetime -lz -lgrass_gis
> -lgrass_datetime -lz -lgrass_dgl -lgrass_dig2 -lgrass_gis
> -lgrass_datetime -lz -lgrass_rtree -lgrass_gis -lgrass_datetime
> -lz -lgrass_linkm -lgrass_rtree -lgrass_dig2 -lgrass_gis
> -lgrass_datetime -lz -lgrass_rtree -lgrass_dgl -lgrass_rtree
> -lgrass_linkm -lgrass_dbmiclient -lgrass_dbmibase -lgrass_gis
> -lgrass_datetime -lz -lgrass_gis -lgrass_datetime -lz
> -lgrass_dbmibase -lgrass_gis -lgrass_datetime -lz -L/usr/lib
> -lgdal1.6.0 -lgrass_dbmiclient -lgrass_dbmibase -lgrass_gis
> -lgrass_datetime -lz -lgrass_gis -lgrass_datetime -lz
> -lgrass_dbmibase -lgrass_gis -lgrass_datetime -lz -lgrass_gis
> -lgrass_datetime -lz -lm -lz
> make htmlcmd
> make[1]: Entering directory
> `/usr/lib/grass64/grass-addons/raster/r.stream.extract'
> make /usr/lib/grass64/docs/html/r.stream.extract.html
> HTMLSRC=/usr/lib/grass64/bin/r.stream.extract
> make[2]: Entering directory
> `/usr/lib/grass64/grass-addons/raster/r.stream.extract'
> if [ "/usr/lib/grass64/bin/r.stream.extract" != "" ] ; then
> GISRC=/usr/lib/grass64/demolocation/.grassrc64
> GISBASE=/build/buildd/grass-6.4.0~rc5/dist.i486-pc-linux-gnu
> PATH="/usr/lib/grass64/bin:$PATH"
> LD_LIBRARY_PATH="/usr/lib/grass64/bin:/usr/lib/grass64/lib:" LC_ALL=C
> fakeroot /usr/lib/grass64/bin/r.stream.extract --html-description <
> /dev/null | grep -v '</body>\|</html>' > r.stream.extract.tmp.html ;
> true ; fi
> ERROR: G_getenv(): Variable LOCATION_NAME not set
> /usr/lib/grass64/tools/mkhtml.sh r.stream.extract ; mkdir -p
> /usr/lib/grass64/docs/html ; /usr/bin/install -c -m 644
> r.stream.extract.tmp.html
> /usr/lib/grass64/docs/html/r.stream.extract.html ; for file in *.png
> *.jpg ; do head -n 1 $file | grep '^#!' > /dev/null ; if [ $? -ne 0 ]
> ; then /usr/bin/install -c -m 644 $file /usr/lib/grass64/docs/html ;
> fi done 2> /dev/null ; true
> /bin/sh: /usr/lib/grass64/tools/mkhtml.sh: not found
> make[2]: Leaving directory
> `/usr/lib/grass64/grass-addons/raster/r.stream.extract'
> make[1]: Leaving directory
> `/usr/lib/grass64/grass-addons/raster/r.stream.extract'
> make mancmd
> make[1]: Entering directory
> `/usr/lib/grass64/grass-addons/raster/r.stream.extract'
> make /usr/lib/grass64/man/man1/r.stream.extract.1
> MANSRC=/usr/lib/grass64/docs/html/r.stream.extract.html
> make[2]: Entering directory
> `/usr/lib/grass64/grass-addons/raster/r.stream.extract'
> mkdir -p /usr/lib/grass64/man/man1
> GRASS_PERL=/usr/bin/perl VERSION_NUMBER=6.4.0RC5 sh
> /build/buildd/grass-6.4.0~rc5/tools/g.html2man/g.html2man
> /usr/lib/grass64/docs/html/r.stream.extract.html
> /usr/lib/grass64/man/man1/r.stream.extract.1 1
> sh: Can't open /build/buildd/grass-6.4.0~rc5/tools/g.html2man/g.html2man
> make[2]: *** [/usr/lib/grass64/man/man1/r.stream.extract.1] Error 2
> make[2]: Leaving directory
> `/usr/lib/grass64/grass-addons/raster/r.stream.extract'
> make[1]: *** [mancmd] Error 2
> make[1]: Leaving directory
> `/usr/lib/grass64/grass-addons/raster/r.stream.extract'
> make: *** [cmd] Error 2
>
>
> On Thu, Nov 12, 2009 at 10:32 AM, Glynn Clements
> <glynn at gclements.plus.com> wrote:
>>
>> M S wrote:
>>
>>> I'm on Kubuntu 9.10, using both 32 and 64 bit systems. This output is
>>> from 32bit. It is GRASS 6.4 RC5. Seems to be the same logged issue
>>> of defaulting to /build rather than /var/lib/grass64
>>>
>>> -------------------------
>>> I ran "sudo make MODULE_TOPDIR=/usr/lib/grass64"
>>>
>>> This is the first line of output" gcc
>>> -I/build/buildd/grass-6.4.0~rc5/dist.i486-pc-linux-gnu/include -Wall
>>> -g -O -I/usr/include/gdal -DPACKAGE=\""grassmods"\"
>>> -I/build/buildd/grass-6.4.0~rc5/dist.i486-pc-linux-gnu/include -o
>>> OBJ.i486-pc-linux-gnu/close.o -c close.c "
>>> ---------------------------
>>>
>>> If I apply the GRASS_HOME=/usr/lib/grass64:
>>>
>>> --------------------------
>>> $ sudo make MODULE_TOPDIR=/usr/lib/grass64 GRASS_HOME=/usr/lib/grass64
>>>
>>> gcc -I/usr/lib/grass64/dist.i486-pc-linux-gnu/include -Wall -g -O
>>> -I/usr/include/gdal -DPACKAGE=\""grassmods"\"
>>> -I/usr/lib/grass64/dist.i486-pc-linux-gnu/include -o
>>> OBJ.i486-pc-linux-gnu/close.o -c close.c
>>> close.c:1:23: error: grass/gis.h: No such file or directory
>>> close.c:2:27: error: grass/glocale.h: No such file or directory
>>> close.c:3:24: error: grass/dbmi.h: No such file or directory
>>> close.c:4:24: error: grass/Vect.h: No such file or directory
>>> -------------------------
>>>
>>> Should it be looking in /usr/lib/grass64/include, instead of
>>> /usr/lib/grass64/dist.i486-pc-linux-gnu/include ? The latter
>>> directory is empty.
>>>
>>> If so, how do I remove the "dist.i486-pc-linux--gnu" portion from the
>>> gcc statement?
>>
>> You could try ARCH_DISTDIR=/usr/lib/grass64, but this may not be
>> sufficient for complex cases. If you need to search both the installed
>> version and the build directory for headers and/or libraries, you will
>> need to set ARCH_INC and/or ARCH_LIBPATH explicitly.
>>
>> If you still have problems, look at the first two sections of
>> Grass.make; this defines the most important variables.
>>
>> 6.x is still a bit of a mess in this regard.
>>
>> In 7.0, ARCH_DISTDIR controls where output files go, while GISBASE
>> controls where existing libraries and headers are found. Both
>> $(ARCH_DISTDIR)/include and $(GISBASE)/include are searched for
>> headers, and both $(ARCH_DISTDIR)/lib and $(GISBASE)/lib are searched
>> for libraries. This allows a package to use both existing headers and
>> libraries and those which are part of the package.
>>
>> RUN_GISBASE is the value of GISBASE used when running GRASS modules as
>> part of the build process (on Windows, this will be in Windows format
>> rather than MSys format).
>>
>> MODULE_TOPDIR is only used to locate the *.make files; everything else
>> uses the variables from those files.
>>
>> --
>> Glynn Clements <glynn at gclements.plus.com>
>>
>
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