[GRASS-user] Compiling from source on RHEL 5.x

[Micha Silver]

On 05/10/2011 04:49 AM, johannnes83 wrote:

> Dear All,
>
> I am trying to install grass on a server that runs on Redhat EL. I am using
> the following commands:
>
> ./configure --with-fftw-libs=/usr/local/lib
> --with-fftw-includes=/usr/local/include --with-opengl=no
>
> which doesn't give any errors. However after running make I get the
> following error messages:
>
> Errors in:
> /home/jsigner/software/grass-6.4.1/general/g.transform
> /home/jsigner/software/grass-6.4.1/imagery/i.cluster
> /home/jsigner/software/grass-6.4.1/imagery/i.gensig
> /home/jsigner/software/grass-6.4.1/imagery/i.gensigset
> /home/jsigner/software/grass-6.4.1/imagery/i.group
> /home/jsigner/software/grass-6.4.1/imagery/i.his.rgb
> /home/jsigner/software/grass-6.4.1/imagery/i.maxlik
> /home/jsigner/software/grass-6.4.1/imagery/i.rectify
> /home/jsigner/software/grass-6.4.1/imagery/i.rgb.his
> /home/jsigner/software/grass-6.4.1/imagery/i.smap/shapiro
> /home/jsigner/software/grass-6.4.1/imagery/i.target
> /home/jsigner/software/grass-6.4.1/imagery/i.pca
> /home/jsigner/software/grass-6.4.1/imagery/i.cca
> /home/jsigner/software/grass-6.4.1/imagery/i.class
> /home/jsigner/software/grass-6.4.1/imagery/i.ortho.photo/menu
> /home/jsigner/software/grass-6.4.1/imagery/i.ortho.photo/i.photo.2image
> /home/jsigner/software/grass-6.4.1/imagery/i.ortho.photo/i.photo.2target
> /home/jsigner/software/grass-6.4.1/imagery/i.ortho.photo/i.photo.camera
> /home/jsigner/software/grass-6.4.1/imagery/i.ortho.photo/i.photo.elev
> /home/jsigner/software/grass-6.4.1/imagery/i.ortho.photo/i.photo.init
> /home/jsigner/software/grass-6.4.1/imagery/i.ortho.photo/i.photo.rectify
> /home/jsigner/software/grass-6.4.1/imagery/i.ortho.photo/i.photo.target
> /home/jsigner/software/grass-6.4.1/imagery/i.points
> /home/jsigner/software/grass-6.4.1/imagery/i.vpoints
> /home/jsigner/software/grass-6.4.1/ps/ps.map
> /home/jsigner/software/grass-6.4.1/raster/r.external
> /home/jsigner/software/grass-6.4.1/raster/r.param.scale
> /home/jsigner/software/grass-6.4.1/raster/r.resamp.rst
> /home/jsigner/software/grass-6.4.1/raster/r.surf.random
> /home/jsigner/software/grass-6.4.1/raster/r.surf.gauss
> /home/jsigner/software/grass-6.4.1/raster/simwe/r.sim.water
> /home/jsigner/software/grass-6.4.1/raster/simwe/r.sim.sediment
> /home/jsigner/software/grass-6.4.1/raster/r.in.gdal
> /home/jsigner/software/grass-6.4.1/raster/r.out.gdal
> /home/jsigner/software/grass-6.4.1/vector/v.extract
> /home/jsigner/software/grass-6.4.1/vector/v.kernel
> /home/jsigner/software/grass-6.4.1/vector/v.surf.rst
> /home/jsigner/software/grass-6.4.1/vector/lidar/v.surf.bspline
> /home/jsigner/software/grass-6.4.1/vector/lidar/v.outlier
> /home/jsigner/software/grass-6.4.1/vector/lidar/v.lidar.correction
> /home/jsigner/software/grass-6.4.1/vector/lidar/v.lidar.edgedetection
> /home/jsigner/software/grass-6.4.1/vector/lidar/v.lidar.growing
>
> As suggest by the error message I tried to run make within some of the
> modules. E.g in r.in.gdal, but again I got an error:
> gcc -L/home/jsigner/software/grass-6.4.1/dist.x86_64-unknown-linux-gnu/lib
> -Wl,--export-dynamic
> -Wl,-rpath-link,/home/jsigner/software/grass-6.4.1/dist.x86_64-unknown-linux-gnu/lib
> -o
> /home/jsigner/software/grass-6.4.1/dist.x86_64-unknown-linux-gnu/bin/r.in.gdal
> OBJ.x86_64-unknown-linux-gnu/main.o  -lgrass_gproj -lgrass_gis
> -lgrass_datetime -lz     -lproj  -L/usr/local/lib -lgdal  -lgrass_gis
> -lgrass_datetime -lz     -lgrass_I -lgrass_gis -lgrass_datetime -lz
> -L/usr/local/lib -lgdal -lgrass_gmath -lgrass_gis -lgrass_datetime -lz
> -lm  -lz
> /home/jsigner/software/grass-6.4.1/dist.x86_64-unknown-linux-gnu/lib/libgrass_gmath.so:
> undefined reference to `fftw_execute'
> /home/jsigner/software/grass-6.4.1/dist.x86_64-unknown-linux-gnu/lib/libgrass_gmath.so:
> undefined reference to `fftw_destroy_plan'
> /home/jsigner/software/grass-6.4.1/dist.x86_64-unknown-linux-gnu/lib/libgrass_gmath.so:
> undefined reference to `fftw_plan_dft_2d'
> collect2: ld returned 1 exit status
> make: ***
> [/home/jsigner/software/grass-6.4.1/dist.x86_64-unknown-linux-gnu/bin/r.in.gdal]
> Error 1
>
> My guess was that it might has something to do with fftw, but I no matter
> how I change the configure command (e.g using --without-fftw) the error
> persisted.
>
> Any hints would be very appreciated!

Check that you have both fftw and fftw-devel. These are available from 
the EPEL repo. BTW, why not use the packages already prepared from the 
ELGIS repo? They have 6.4.0 as stable, and 6.4.1 in the "testing" 
branch. If you enable both repos, then GRASS and all its dependencies 
should be no more than a 'yum install ...'


> Johannes
>
> --
> View this message in context: http://osgeo-org.1803224.n2.nabble.com/Compiling-from-source-on-RHEL-5-x-tp6346248p6346248.html
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>


-- 
Micha Silver
Arava Development Co. +972-52-3665918
http://www.surfaces.co.il