[pdal-commits] [PDAL/PDAL] 84bba8: Update arbiter bundle for namespacing gzip functio...

GitHub noreply at github.com
Wed Oct 10 08:54:53 PDT 2018 

  Branch: refs/heads/issue-2221
  Home:   https://github.com/PDAL/PDAL
  Commit: 84bba8de7fff60d3f895e3e88e6c87c22f818977
      https://github.com/PDAL/PDAL/commit/84bba8de7fff60d3f895e3e88e6c87c22f818977
  Author: Connor Manning <connor at hobu.co>
  Date:   2018-10-03 (Wed, 03 Oct 2018)

  Changed paths:
    M vendor/arbiter/arbiter.hpp

  Log Message:
  -----------
  Update arbiter bundle for namespacing gzip functionality.


  Commit: 72b1d344b1c50a03dc4447a444d9d9cafae01906
      https://github.com/PDAL/PDAL/commit/72b1d344b1c50a03dc4447a444d9d9cafae01906
  Author: Andrew Bell <andrew.bell.ia at gmail.com>
  Date:   2018-10-03 (Wed, 03 Oct 2018)

  Changed paths:
    M io/BpfReader.cpp
    M io/EptReader.cpp
    M io/GDALReader.cpp
    M io/Ilvis2Reader.cpp
    M io/OptechReader.cpp
    M io/TIndexReader.cpp
    M plugins/greyhound/io/GreyhoundReader.cpp
    M plugins/icebridge/io/IcebridgeReader.cpp
    M plugins/matlab/io/MatlabReader.cpp
    M plugins/rdb/io/RdbReader.cpp
    M test/unit/io/OptechReaderTest.cpp

  Log Message:
  -----------
  Set SRS if it hasn't been overridden by an option. (#2203)

Close #2194


  Commit: eca09bf0309ef717b66515a7ae82122e989228e0
      https://github.com/PDAL/PDAL/commit/eca09bf0309ef717b66515a7ae82122e989228e0
  Author: Andrew Bell <andrew.bell.ia at gmail.com>
  Date:   2018-10-03 (Wed, 03 Oct 2018)

  Changed paths:
    M filters/CropFilter.cpp
    M pdal/Streamable.hpp
    M test/unit/filters/CropFilterTest.cpp

  Log Message:
  -----------
  Use proper logic for multiple crop regions. (#2204)

Close #2198


  Commit: 8f1eee43c3f696135134a4effd68a2a6abedaf48
      https://github.com/PDAL/PDAL/commit/8f1eee43c3f696135134a4effd68a2a6abedaf48
  Author: Connor Manning <connor at hobu.co>
  Date:   2018-10-03 (Wed, 03 Oct 2018)

  Changed paths:
    M pdal/PipelineManager.cpp
    M pdal/PipelineManager.hpp

  Log Message:
  -----------
  Change PipelineManager::executeStream argument to be a StreamPointTable rather than FixedPointTable. (#2182)


  Commit: e546cc64bbac78b3e1f81544555e8035f8eb589f
      https://github.com/PDAL/PDAL/commit/e546cc64bbac78b3e1f81544555e8035f8eb589f
  Author: Connor Manning <connor at hobu.co>
  Date:   2018-10-03 (Wed, 03 Oct 2018)

  Changed paths:
    M doc/pipeline.rst
    M pdal/PipelineReaderJSON.cpp
    A test/data/pipeline/array-pipeline.json.in
    M test/unit/PipelineManagerTest.cpp

  Log Message:
  -----------
  Allow array pipelines without the encapsulating object. (#2183)


  Commit: daa8a505ccf04be26c582a67abc394e8cc55d3a6
      https://github.com/PDAL/PDAL/commit/daa8a505ccf04be26c582a67abc394e8cc55d3a6
  Author: Kyle Mann <39525199+kylemann16 at users.noreply.github.com>
  Date:   2018-10-05 (Fri, 05 Oct 2018)

  Changed paths:
    M appveyor.yml
    M cmake/examples/hobu-config.sh
    M cmake/examples/hobu-windows.bat
    M cmake/options.cmake
    A doc/stages/readers.i3s.rst
    A doc/stages/readers.slpk.rst
    M pdal/StageExtensions.cpp
    M pdal/StageFactory.cpp
    M pdal/util/FileUtils.cpp
    M pdal/util/FileUtils.hpp
    M plugins/CMakeLists.txt
    A plugins/i3s/CMakeLists.txt
    A plugins/i3s/io/EsriReader.cpp
    A plugins/i3s/io/EsriReader.hpp
    A plugins/i3s/io/EsriUtil.cpp
    A plugins/i3s/io/EsriUtil.hpp
    A plugins/i3s/io/I3SReader.cpp
    A plugins/i3s/io/I3SReader.hpp
    A plugins/i3s/io/SlpkExtractor.cpp
    A plugins/i3s/io/SlpkExtractor.hpp
    A plugins/i3s/io/SlpkReader.cpp
    A plugins/i3s/io/SlpkReader.hpp
    A plugins/i3s/io/pool.hpp
    A plugins/i3s/lepcc/CMakeLists.txt
    A plugins/i3s/lepcc/src/BitMask.cpp
    A plugins/i3s/lepcc/src/BitMask.h
    A plugins/i3s/lepcc/src/BitStuffer2.cpp
    A plugins/i3s/lepcc/src/BitStuffer2.h
    A plugins/i3s/lepcc/src/ClusterRGB.cpp
    A plugins/i3s/lepcc/src/ClusterRGB.h
    A plugins/i3s/lepcc/src/Common.cpp
    A plugins/i3s/lepcc/src/Common.h
    A plugins/i3s/lepcc/src/FlagBytes.cpp
    A plugins/i3s/lepcc/src/FlagBytes.h
    A plugins/i3s/lepcc/src/Huffman.cpp
    A plugins/i3s/lepcc/src/Huffman.h
    A plugins/i3s/lepcc/src/Intensity.cpp
    A plugins/i3s/lepcc/src/Intensity.h
    A plugins/i3s/lepcc/src/LEPCC.cpp
    A plugins/i3s/lepcc/src/LEPCC.h
    A plugins/i3s/lepcc/src/Test_C_Api.cpp
    A plugins/i3s/lepcc/src/include/lepcc_c_api.h
    A plugins/i3s/lepcc/src/include/lepcc_tpl_api.h
    A plugins/i3s/lepcc/src/include/lepcc_types.h
    A plugins/i3s/lepcc/src/lepcc_c_api_impl.cpp
    A plugins/i3s/lepcc/src/utl_const_array.h
    A plugins/i3s/test/SlpkReaderTest.cpp
    A plugins/i3s/test/i3sReaderTest.cpp
    M scripts/appveyor/config.cmd
    M scripts/appveyor/test.cmd
    M scripts/ci/script.sh
    A test/data/i3s/SMALL_AUTZEN_LAS_All .zip
    A test/data/i3s/SMALL_AUTZEN_LAS_All.bin
    A test/data/i3s/SMALL_AUTZEN_LAS_All.slpk
    A test/data/i3s/SMALL_AUTZEN_LAS_All/3dSceneLayer.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/@specialIndexFileHASH128@
    A test/data/i3s/SMALL_AUTZEN_LAS_All/metadata.json
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodepages/0.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/1024.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/128.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/16.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/2.bin.pccint
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/256.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/32.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/512.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/8.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/geometries/0.bin.pccxyz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/1.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/1024.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/128.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/16.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/2.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/256.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/32.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/512.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/8.json.gz
    A test/data/i3s/plineAutzen.json
    A test/data/i3s/plineHelsinki.json
    M vendor/arbiter/arbiter.hpp

  Log Message:
  -----------
  I3S and SLPK readers (#2176)

* scans info file and adds dimensions to pointtable layout

* reads binary files from geometries url'

* added lepcc src files to i3s

* Update arbiter bundle for gzip decompression support.

* Add include.

* Include guards.

* Try bundling rapidxml before gzip.

* got decompression working and put into view. need to add gzip decomp and search children nodes

* translates all node geometries, but only xyz's

* RGB, Intensity, XYZ working. Reading only from leaf nodes currently.

* scans info file and adds dimensions to pointtable layout

* reads binary files from geometries url'

* added lepcc src files to i3s

* Update arbiter bundle for gzip decompression support.

* Add include.

* Include guards.

* Try bundling rapidxml before gzip.

* got decompression working and put into view. need to add gzip decomp and search children nodes

* translates all node geometries, but only xyz's

* updated  lepcc repo

* can't get m_arbiter to be declared in lambda scope

* Threading with 2 pools

* Threading works. Adding args

* bounds and thread counts working. tested with info and translate on provided autzen i3s file

* remove tailing / from input url

* making qol improvements

* now working with oriented bounding boxes

* added test files for i3sreader

* pre fetch commit

* Add SlpkExtractor.

* added test file

* can now read slpk as well as from http, created tests for bounding in local and remote files with autzen and small autzen

* added string include to clusterRGB

* added overrides and changed iterator to size_t to match size()

* made visual changes

* A bit of styling consistency.

* More no-op styling tweaks.

* added copyrights

* changed catch to fileExists test. Added slpk to stage extensions

* created docs

* style changes to i3s doc, added doc link to i3sReader.cpp

* added copyright

* Virtualize i3s/slpk readers.

* quat changes

* Quaternion calculations.

* Add pseudo-code for generic i3s dimension handling.

* dimension changes

* Get generic types working.

* String comparison.

* set as changes

* Fix SRS handling.

* changed dimensions for fewer elses

* added slpk reader doc and slpk from i3s doc

* changed loop in esrireader to not use errors. Throw errors on bad lepcc decompressions. Removed random if statement in infokernel. Other minor style fixes.

* removed couts

* Don't change byte order of magic number.

* Better description for createDirectories.

* Made requested changes: shortened file Utils, fixed bad copies in decompression

* adding throwErrors and minor adjustments

* changed from EsriReceiver to EsriUtil. Made some clearer variable names in parsebox

* Doc typos

* Add json check

* added else for undefined dimension

* changed json to be correct

* added dimType map. fixed json test

* elevation no longer inserts to dimmap

* added zlib check to cmake

* fixed thread problems, added await(), added size checks on data)

* switch on I3S

* I3S for appveyor

* fixed test file, fixed if else chain in addDimensions

* get windows happier

* fetch cacert so curl works for ssl, only output curl noise in debug mode

* make I3S tests an optional build/run -- the SLPK reader tests the basic software, and the I3S does remote-over-the-internet requests which take about 60s. to run

* added json checks

* added dimensions option

* added dimensions to docs and made them case insensitive

* unpacking returns correctly

* added lod option and corresponding examples in docs

* added lod tests

* changed lod to depth of node tree

* added depth test

* changed depth to min and max density searches

* updated docs

* adjusted std::max and density logic

* changed parentheses locations

* look for nodePerIndexPage in json

* works with Esri pointcloud 1.6 as long as it's lepcc encoding

* added version functionality. added pipeline jsons to test/data/i3s

* Remove much include file cruft.
Remove EsriUtil code from global pdal namespace.
Use consistent throw/catch.
Formatting stuff.
Various small changes.

* Remove comment.

* added retry block

* removed cout

* changed continue to break in retry

* Simplify ternary logic.

* changed try logic

* Don't throwError() on last line to avoid return warning.

* Fix logic bug.

* changed i3s test variable

* Build cleanup.

* Update arbiter bundle for namespacing gzip functionality.


  Commit: 34a197a7ceb1fd592d50cefc2cc0115ea6360ec8
      https://github.com/PDAL/PDAL/commit/34a197a7ceb1fd592d50cefc2cc0115ea6360ec8
  Author: Howard Butler <howard at hobu.co>
  Date:   2018-10-05 (Fri, 05 Oct 2018)

  Changed paths:
    M pdal/util/Utils.cpp

  Log Message:
  -----------
  we don't need to escape /'s in JSON, so let's stop that (#2208)


  Commit: 8e77e93df9d7eaaa4cf210e9c215dfee118dac4c
      https://github.com/PDAL/PDAL/commit/8e77e93df9d7eaaa4cf210e9c215dfee118dac4c
  Author: Howard Butler <howard at hobu.co>
  Date:   2018-10-05 (Fri, 05 Oct 2018)

  Changed paths:
    M cmake/examples/hobu-config.sh

  Log Message:
  -----------
  catch up to my config


  Commit: 978f96a320daaeb526a55d74b7246e4c97b780ba
      https://github.com/PDAL/PDAL/commit/978f96a320daaeb526a55d74b7246e4c97b780ba
  Author: Howard Butler <howard at hobu.co>
  Date:   2018-10-05 (Fri, 05 Oct 2018)

  Changed paths:
    M appveyor.yml
    M cmake/examples/hobu-config.sh
    M cmake/examples/hobu-windows.bat
    M cmake/options.cmake
    A doc/stages/readers.i3s.rst
    A doc/stages/readers.slpk.rst
    M pdal/StageExtensions.cpp
    M pdal/StageFactory.cpp
    M pdal/util/FileUtils.cpp
    M pdal/util/FileUtils.hpp
    M pdal/util/Utils.cpp
    M plugins/CMakeLists.txt
    A plugins/i3s/CMakeLists.txt
    A plugins/i3s/io/EsriReader.cpp
    A plugins/i3s/io/EsriReader.hpp
    A plugins/i3s/io/EsriUtil.cpp
    A plugins/i3s/io/EsriUtil.hpp
    A plugins/i3s/io/I3SReader.cpp
    A plugins/i3s/io/I3SReader.hpp
    A plugins/i3s/io/SlpkExtractor.cpp
    A plugins/i3s/io/SlpkExtractor.hpp
    A plugins/i3s/io/SlpkReader.cpp
    A plugins/i3s/io/SlpkReader.hpp
    A plugins/i3s/io/pool.hpp
    A plugins/i3s/lepcc/CMakeLists.txt
    A plugins/i3s/lepcc/src/BitMask.cpp
    A plugins/i3s/lepcc/src/BitMask.h
    A plugins/i3s/lepcc/src/BitStuffer2.cpp
    A plugins/i3s/lepcc/src/BitStuffer2.h
    A plugins/i3s/lepcc/src/ClusterRGB.cpp
    A plugins/i3s/lepcc/src/ClusterRGB.h
    A plugins/i3s/lepcc/src/Common.cpp
    A plugins/i3s/lepcc/src/Common.h
    A plugins/i3s/lepcc/src/FlagBytes.cpp
    A plugins/i3s/lepcc/src/FlagBytes.h
    A plugins/i3s/lepcc/src/Huffman.cpp
    A plugins/i3s/lepcc/src/Huffman.h
    A plugins/i3s/lepcc/src/Intensity.cpp
    A plugins/i3s/lepcc/src/Intensity.h
    A plugins/i3s/lepcc/src/LEPCC.cpp
    A plugins/i3s/lepcc/src/LEPCC.h
    A plugins/i3s/lepcc/src/Test_C_Api.cpp
    A plugins/i3s/lepcc/src/include/lepcc_c_api.h
    A plugins/i3s/lepcc/src/include/lepcc_tpl_api.h
    A plugins/i3s/lepcc/src/include/lepcc_types.h
    A plugins/i3s/lepcc/src/lepcc_c_api_impl.cpp
    A plugins/i3s/lepcc/src/utl_const_array.h
    A plugins/i3s/test/SlpkReaderTest.cpp
    A plugins/i3s/test/i3sReaderTest.cpp
    M scripts/appveyor/config.cmd
    M scripts/appveyor/test.cmd
    M scripts/ci/script.sh
    A test/data/i3s/SMALL_AUTZEN_LAS_All .zip
    A test/data/i3s/SMALL_AUTZEN_LAS_All.bin
    A test/data/i3s/SMALL_AUTZEN_LAS_All.slpk
    A test/data/i3s/SMALL_AUTZEN_LAS_All/3dSceneLayer.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/@specialIndexFileHASH128@
    A test/data/i3s/SMALL_AUTZEN_LAS_All/metadata.json
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodepages/0.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/1024.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/128.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/16.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/2.bin.pccint
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/256.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/32.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/512.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/attributes/8.bin.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/nodes/0/geometries/0.bin.pccxyz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/1.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/1024.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/128.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/16.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/2.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/256.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/32.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/512.json.gz
    A test/data/i3s/SMALL_AUTZEN_LAS_All/statistics/8.json.gz
    A test/data/i3s/plineAutzen.json
    A test/data/i3s/plineHelsinki.json
    M vendor/arbiter/arbiter.hpp

  Log Message:
  -----------
  Merge branch 'master' of github.com:PDAL/PDAL


  Commit: dcb820c07cf3a9a6338462c4223e619b0dea886a
      https://github.com/PDAL/PDAL/commit/dcb820c07cf3a9a6338462c4223e619b0dea886a
  Author: Howard Butler <howard at hobu.co>
  Date:   2018-10-05 (Fri, 05 Oct 2018)

  Changed paths:
    M cmake/examples/hobu-config.sh
    M plugins/rdb/test/RdbReaderTest.cpp

  Log Message:
  -----------
  RIEGL RDB test adjustment in preparation for 1.8RC


  Commit: ffd563aac31ae332f2bb76649249591fed9e9bed
      https://github.com/PDAL/PDAL/commit/ffd563aac31ae332f2bb76649249591fed9e9bed
  Author: Norbert Wenzel <norbertwenzel at users.noreply.github.com>
  Date:   2018-10-07 (Sun, 07 Oct 2018)

  Changed paths:
    M cmake/macros.cmake

  Log Message:
  -----------
  Fix typo (#2217)


  Commit: 8c84b04949adab6eb69c32dd08f649be95ce521b
      https://github.com/PDAL/PDAL/commit/8c84b04949adab6eb69c32dd08f649be95ce521b
  Author: Andrew Bell <andrew.bell.ia at gmail.com>
  Date:   2018-10-09 (Tue, 09 Oct 2018)

  Changed paths:
    M pdal/Metadata.hpp
    M test/unit/MetadataTest.cpp

  Log Message:
  -----------
  Allow update of metadata nodes (#2220)

* Use proper logic for multiple crop regions.
Close #2198

* Set SRS if it hasn't been overridden by an option.
Close #2194

* Add addOrUpdate support for generic MetadataNode.
Add test support.
Fix description setting error.


  Commit: 32bb0763870bce86aada9af9136200c3632b7657
      https://github.com/PDAL/PDAL/commit/32bb0763870bce86aada9af9136200c3632b7657
  Author: Andrew Bell <andrew.bell.ia at gmail.com>
  Date:   2018-10-09 (Tue, 09 Oct 2018)

  Changed paths:
    M pdal/Metadata.hpp

  Log Message:
  -----------
  Remove unhelpful reference specifier.


  Commit: 6b40cb8cb6cfac286e3b940cad4184ed78c23b77
      https://github.com/PDAL/PDAL/commit/6b40cb8cb6cfac286e3b940cad4184ed78c23b77
  Author: Norbert Wenzel <norbertwenzel at users.noreply.github.com>
  Date:   2018-10-10 (Wed, 10 Oct 2018)

  Changed paths:
    M plugins/rdb/CMakeLists.txt

  Log Message:
  -----------
  Fix CMake dependencies for Riegl RDB Plugin (#2219)

* Remove explicit include directory setting

The linked target `rdbcpp` already sets `target_include_directories`.
CMake propagates these directories, so no use adding them again.

* Link to PDAL provided Eigen vendor library

The previously used CMake variable `EIGEN_INCLUDE_DIRS` was empty
when no Eigen library was installed. Since PDAL base lib is built
with `vendor/eigen` in any case, using the very same Eigen library
should be the safest option for a PDAL plugin.

* Add include directory for JSONCPP library

When JSONCPP is not installed ie. the include files are in a common
directory that is searched for library includes anyway, explicitly
setting the include directory is required.


  Commit: 2514d22498de8f24cd11ec6abefb49273559403b
      https://github.com/PDAL/PDAL/commit/2514d22498de8f24cd11ec6abefb49273559403b
  Author: Andrew Bell <andrew.bell.ia at gmail.com>
  Date:   2018-10-10 (Wed, 10 Oct 2018)

  Changed paths:
    M cmake/examples/hobu-config.sh
    M cmake/macros.cmake
    M doc/pipeline.rst
    M pdal/PipelineManager.cpp
    M pdal/PipelineManager.hpp
    M pdal/PipelineReaderJSON.cpp
    M pdal/util/Utils.cpp
    M plugins/rdb/CMakeLists.txt
    M plugins/rdb/test/RdbReaderTest.cpp
    A test/data/pipeline/array-pipeline.json.in
    M test/unit/PipelineManagerTest.cpp

  Log Message:
  -----------
  Merge branch 'master' into issue-2221


Compare: https://github.com/PDAL/PDAL/compare/d05b89dee198...2514d22498de
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