[postgis-users] GIST index speed

Paul Ramsey pramsey at cleverelephant.ca
Fri Jun 6 10:24:38 PDT 2008


Steve,

Any chance you could share your data with the developers? this is a
very strange result.

P

On Fri, Jun 6, 2008 at 9:37 AM, Steve Kondik <shade at chemlab.org> wrote:
> -----BEGIN PGP SIGNED MESSAGE-----
> Hash: SHA1
>
> Steve Kondik wrote:
>> Mark Cave-Ayland wrote:
>>> Steve Kondik wrote:
>>>> -----BEGIN PGP SIGNED MESSAGE-----
>>>> Hash: SHA1
>>>>
>>>> I'm seeing this same kind of slowness.  I am in the process of migrating
>>>> an application from Oracle to Postgres.  One query that seems to take
>>>> longer than it should is a very simple point-in-bbox query which takes 3
>>>> seconds.  There are 32000 rows in the table, and the query is as simple
>>>> as it can be:
>>>>
>>>> select count(*) from geography where type='Z' and centroid && (select
>>>> geometry from geography where id=69495);
>>>>
>>>> The second geography is the USA, so this query gets all zipcodes inside
>>>> the bbox, using precalculated centroids.  The query plan looks fine as
>>>> well:
>>>>
>>>>  Aggregate  (cost=16.56..16.57 rows=1 width=0) (actual
>>>> time=2407.123..2407.125 rows=1 loops=1)
>>>>    InitPlan
>>>>      ->  Index Scan using geography_pkey on geography  (cost=0.00..8.28
>>>> rows=1 width=4528) (actual time=0.027..0.030 rows=1 loops=1)
>>>>            Index Cond: (id = 69495)
>>>>    ->  Index Scan using idx_geography_centroid_z on geography
>>>> (cost=0.00..8.28 rows=1 width=0) (actual time=1.417..2355.049 rows=29687
>>>> loops=1)
>>>>          Index Cond: (centroid && $0)
>>>>          Filter: (centroid && $0)
>>>>  Total runtime: 2407.194 ms
>>>> (8 rows)
>>>>
>>>>
>>>> Any thoughts?  This query takes 200ms on Oracle.  It seems like
>>>> something is wrong for it to take 3 seconds on PostGIS.  It's faster for
>>>> smaller geometries (like a state), but I don't understand why since its
>>>> just point-inside-bbox.
>>
>>> Hi Steve,
>>
>>> Well from the above you can see fairly easily that the time is
>>> disappearing into the second index scan. The above output doesn't look
>>> quite right somehow (it's missing at least one node indicator) - can you
>>> try cutting and pasting the exact output from EXPLAIN into an email
>>> again? Also we'll need the output of "\d geography" from within psql.
>>
>>
>>> ATB,
>>
>>> Mark.
>>
>>
>>
>> Sure thing.  It's taking quite a bit longer now because we're doing some
>> bulk loading.  When nothing else is running, the query takes about 4
>> seconds.
>>
>>
>> health_central_22=> explain analyze select count(*) from geography where
>> type='Z' and centroid && (select geometry from geography where id=69495);
>>
>> QUERY PLAN
>>
>> -
>> ---------------------------------------------------------------------------------------------------------------------------------------------------
>>  Aggregate  (cost=16.56..16.57 rows=1 width=0) (actual
>> time=16534.739..16534.741 rows=1 loops=1)
>>    InitPlan
>>      ->  Index Scan using geography_pkey on geography  (cost=0.00..8.28
>> rows=1 width=4528) (actual time=0.076..0.080 rows=1 loops=1)
>>            Index Cond: (id = 69495)
>>    ->  Index Scan using idx_geography_centroid_z on geography
>> (cost=0.00..8.28 rows=1 width=0) (actual time=25.453..16192.427
>> rows=29687 loops=1)
>>          Index Cond: (centroid && $0)
>>          Filter: (centroid && $0)
>>  Total runtime: 16534.809 ms
>> (8 rows)
>>
>> health_central_22=> \d geography
>>              Table "public.geography"
>>     Column    |          Type          | Modifiers
>> --------------+------------------------+-----------
>>  type         | character(1)           | not null
>>  id           | bigint                 | not null
>>  centroid     | geometry               |
>>  geometry     | geometry               |
>>  name         | character varying(32)  | not null
>>  population   | bigint                 |
>>  abbreviation | character varying(2)   |
>>  po_name      | character varying(100) |
>>  id_geo_state | bigint                 |
>> Indexes:
>>     "geography_pkey" PRIMARY KEY, btree (id)
>>     "idx_geography_2" btree (name)
>>     "idx_geography_3" btree (abbreviation)
>>     "idx_geography_4" btree (id_geo_state)
>>     "idx_geography_centroid" gist (centroid)
>>     "idx_geography_centroid_c" gist (centroid) WHERE type = 'C'::bpchar
>>     "idx_geography_centroid_s" gist (centroid) WHERE type = 'S'::bpchar
>>     "idx_geography_centroid_z" gist (centroid) WHERE type = 'Z'::bpchar
>>     "idx_geography_geometry" gist (geometry) CLUSTER
>>     "idx_geography_geometry_c" gist (geometry) WHERE type = 'C'::bpchar
>>     "idx_geography_geometry_r" gist (geometry) WHERE type = 'R'::bpchar
>>     "idx_geography_geometry_s" gist (geometry) WHERE type = 'S'::bpchar
>>     "idx_geography_geometry_z" gist (geometry) WHERE type = 'Z'::bpchar
>> Foreign-key constraints:
>>     "fk_geography_1" FOREIGN KEY (id_geo_state) REFERENCES geography(id)
>>
>
> Adding force_2d speeds this up immensely.  Not sure I understand why
> this is necessary, but I'm still getting used to PostGIS.
>
>
> health_central_22=> explain analyze select id,name from geography where
> type='Z' and centroid && (select force_2d(geometry) from geography where
> id=69495);
>                                                                QUERY
> PLAN
> -
> ------------------------------------------------------------------------------------------------------------------------------------------
>  Index Scan using idx_geography_centroid on geography  (cost=8.29..16.57
> rows=1 width=14) (actual time=0.263..125.338 rows=29687 loops=1)
>   Index Cond: (centroid && $0)
>   Filter: ((centroid && $0) AND (type = 'Z'::bpchar))
>   InitPlan
>     ->  Index Scan using geography_pkey on geography  (cost=0.00..8.29
> rows=1 width=4441) (actual time=0.158..0.161 rows=1 loops=1)
>           Index Cond: (id = 69495)
>  Total runtime: 171.229 ms
> (7 rows)
> -----BEGIN PGP SIGNATURE-----
> Version: GnuPG v1.4.6 (GNU/Linux)
> Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
>
> iD8DBQFISWe8MrBfzfMVwMcRAkUBAJ9uLeK7kLotz6+CUuKd2Tg5pNj2XwCeLVXV
> RlUY5e2Dwyx1EWa3ln0Ky6M=
> =B0/W
> -----END PGP SIGNATURE-----
> _______________________________________________
> postgis-users mailing list
> postgis-users at postgis.refractions.net
> http://postgis.refractions.net/mailman/listinfo/postgis-users
>



More information about the postgis-users mailing list