[postgis-users] Voronoi in PostGIS

[Dheeraj Chand]

Hi, hi!

Thanks so much for responding while I know that you're busy. 

Yeah, if I could use Ports or Homebrew with some of the other things that I need to do, I totally would, believe me. On my Ubuntu machine, I'm all apt, all the time.

Thanks for correcting the error on my R listing. That was a typo in my ~/.bash_profile that's now been fixed.

What I was saying about pgk-config was that I am unsure of what went wrong.  I compiled according to the instructions I linked to here (http://cairographics.org/end_to_end_build_for_mac_os_x/) and added PKG_CONFIG to my $PATH, but I still get this confusing output:

GENESISARK:~ dheerajchand$ which pgk-config
GENESISARK:~ dheerajchand$ echo $PATH
/Users/dheerajchand/pear/bin/:/Applications/ImageMagick-6.7.2/bin:/Users/dheerajchand/Projects/src/pkgthings/bin/pkg-config:/usr/local/pgsql-9.1/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/X11/bin:/usr/local/git/bin:/opt/local/bin:/usr/local/mysql/bin
GENESISARK:~ dheerajchand$ echo $PKG_CONFIG
/Users/dheerajchand/Projects/src/pkgthings/bin/pkg-config
GENESISARK:~ dheerajchand$ ls $PKG_CONFIG
328 -rwxr-xr-x  1 staff  164356 Mar 13 13:33 /Users/dheerajchand/Projects/src/pkgthings/bin/pkg-config
GENESISARK:~ dheerajchand$ 

Also, if you scroll down further in the original append, you'll see that I did run it as sudo, so I am very confused. My thought is that I must have done something wrong with pkg-config.

-dx

 

On Mar 13, 2012, at 6:36 PM, Puneet Kishor wrote:

> Dheeraj,
> 
> Since you don't use Macports, I will be completely guessing as to the source of the problem. I have not used the Kyngchaos installers at all. My problem is the other way around -- I need way too much stuff, and I'd rather have a single overarching mechanism for installing software. So, I either hand roll everything or let someone else do it... Macports comes the closest to filling my need. Also, if I occasionally do have to install something by hand (case in point being PL/R), it seems to work ok with Macports.
> 
> Anyway -- I am assuming you have R installed correctly, although I do see a mysterious double slash in the path to R components, for example, /Library/Frameworks/R.framework/Resources//include and /Library/Frameworks/R.framework/Resources//lib
> 
> Second issue, `make install` won't work without `sudo` because you are trying to install in /usr/local/ which requires correct permissions. That is why you get "mkdir: /usr/local/pgsql-9.1/share/doc/extension: Permission denied"
> 
> Third, do you have `pkg-config` installed or not? Here is what I have
> 
> 	$which pkg-config
> 	/opt/local/bin/pkg-config
> 	$pkg-config --version
> 	0.26
> 
> 
> The pkg-config web site is http://www.freedesktop.org/wiki/Software/pkg-config
> 
> Hope the above gives you a few ideas.
> 
> 
> On Mar 13, 2012, at 6:05 PM, Dheeraj Chand wrote:
> 
>> Thanks!
>> 
>> I don't use MacPorts or Homebrew for a long series of reasons that I'd rather not get into at the moment...So I had to use the Kyng Chaos installers and periodically compile from source when there's something that I need that doesn't have a binary installer.
>> 
>> When I downloaded Jon Conway's source, this was the error that I got, which was that it needed pkg-config.  I suspect that Ports gave it to you already. So I tried installing pkg-config, and this is what I got...
>> 
>> I'm absolutely stymied!
>> 
>> -dx
>> 
>> 
>> On Mar 13, 2012, at 3:41 PM, Puneet Kishor wrote:
>> 
>>> Dheeraj,
>>> 
>>> I did get your message re. problems with installing PL/R. I might be able to help you, but I am tied up in knots with another problem I am trying to solve right now, which I have to attend to right away.
>>> 
>>> Also, note that I didn't use pkg-config (I have no idea what that is). I simply downloaded the PL/R code from Joe Conway's web site and compiled it. There were a few errors mainly to do with wrong paths, and I went about fixing those as those were encountered (only 3 or 4, if I recall correctly). After that it compiled easily. Also, I use macports for my R, Postgres and PostGIS needs, so everything was in /opt/local/.
>>> 
>>> Soon as I get a moment free, I will try to dig up where all I made edits in the PL/R source, and put it up on my web site.
>>> 
>>> 
>>> On Mar 13, 2012, at 3:23 PM, Dheeraj Chand wrote:
>>> 
>>>> Hi,
>>>> 
>>>> I'm trying to install on Mac Lion, and getting an error with pkg-config (appended).
>>>> 
>>>> I'm following the instructions for pkg-config from here: http://cairographics.org/end_to_end_build_for_mac_os_x/
>>>> 
>>>> Anyone able to help me figure out what's going on?
>>>> 
>>>> -dx
>>>> 
>>>> 
>>>> 
>>>> GENESISARK:plr dheerajchand$ USE_PGXS=1 make clean
>>>> rm -f plr.so   libplr.a 
>>>> rm -f plr.sql
>>>> rm -f plr.o pg_conversion.o pg_backend_support.o pg_userfuncs.o pg_rsupport.o
>>>> rm -f doc/html/* doc/plr-US.aux doc/plr-*.log doc/plr-*.out doc/plr-*.pdf doc/plr-*.tex-pdf
>>>> rm -rf results/ regression.diffs regression.out tmp_check/ log/
>>>> GENESISARK:plr dheerajchand$ USE_PGXS=1 make
>>>> sed 's,MODULE_PATHNAME,$libdir/plr,g' plr.sql.in >plr.sql
>>>> gcc -Os -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.6.sdk -D_FILE_OFFSET_BITS=64 -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wformat-security -fno-strict-aliasing -fwrapv  -I"." -I"/Library/Frameworks/R.framework/Resources//include" -I/Library/Frameworks/R.framework/Resources//include -I. -I. -I/usr/local/pgsql-9.1/include/server -I/usr/local/pgsql-9.1/include/internal -I/usr/include/libxml2 -DPKGLIBDIR=\"/usr/local/pgsql-9.1/lib\" -DDLSUFFIX=\".so\" -DR_HOME_DEFAULT=\"/Library/Frameworks/R.framework/Resources/\"  -c -o plr.o plr.c
>>>> gcc -Os -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.6.sdk -D_FILE_OFFSET_BITS=64 -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wformat-security -fno-strict-aliasing -fwrapv  -I"." -I"/Library/Frameworks/R.framework/Resources//include" -I/Library/Frameworks/R.framework/Resources//include -I. -I. -I/usr/local/pgsql-9.1/include/server -I/usr/local/pgsql-9.1/include/internal -I/usr/include/libxml2 -DPKGLIBDIR=\"/usr/local/pgsql-9.1/lib\" -DDLSUFFIX=\".so\" -DR_HOME_DEFAULT=\"/Library/Frameworks/R.framework/Resources/\"  -c -o pg_conversion.o pg_conversion.c
>>>> gcc -Os -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.6.sdk -D_FILE_OFFSET_BITS=64 -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wformat-security -fno-strict-aliasing -fwrapv  -I"." -I"/Library/Frameworks/R.framework/Resources//include" -I/Library/Frameworks/R.framework/Resources//include -I. -I. -I/usr/local/pgsql-9.1/include/server -I/usr/local/pgsql-9.1/include/internal -I/usr/include/libxml2 -DPKGLIBDIR=\"/usr/local/pgsql-9.1/lib\" -DDLSUFFIX=\".so\" -DR_HOME_DEFAULT=\"/Library/Frameworks/R.framework/Resources/\"  -c -o pg_backend_support.o pg_backend_support.c
>>>> gcc -Os -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.6.sdk -D_FILE_OFFSET_BITS=64 -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wformat-security -fno-strict-aliasing -fwrapv  -I"." -I"/Library/Frameworks/R.framework/Resources//include" -I/Library/Frameworks/R.framework/Resources//include -I. -I. -I/usr/local/pgsql-9.1/include/server -I/usr/local/pgsql-9.1/include/internal -I/usr/include/libxml2 -DPKGLIBDIR=\"/usr/local/pgsql-9.1/lib\" -DDLSUFFIX=\".so\" -DR_HOME_DEFAULT=\"/Library/Frameworks/R.framework/Resources/\"  -c -o pg_userfuncs.o pg_userfuncs.c
>>>> gcc -Os -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.6.sdk -D_FILE_OFFSET_BITS=64 -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wformat-security -fno-strict-aliasing -fwrapv  -I"." -I"/Library/Frameworks/R.framework/Resources//include" -I/Library/Frameworks/R.framework/Resources//include -I. -I. -I/usr/local/pgsql-9.1/include/server -I/usr/local/pgsql-9.1/include/internal -I/usr/include/libxml2 -DPKGLIBDIR=\"/usr/local/pgsql-9.1/lib\" -DDLSUFFIX=\".so\" -DR_HOME_DEFAULT=\"/Library/Frameworks/R.framework/Resources/\"  -c -o pg_rsupport.o pg_rsupport.c
>>>> gcc -Os -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.6.sdk -D_FILE_OFFSET_BITS=64 -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wformat-security -fno-strict-aliasing -fwrapv  -bundle -multiply_defined suppress -o plr.so plr.o pg_conversion.o pg_backend_support.o pg_userfuncs.o pg_rsupport.o -L/usr/local/pgsql-9.1/lib -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.6.sdk -Wl,-dead_strip_dylibs   -L/Library/Frameworks/R.framework/Resources//bin -L/Library/Frameworks/R.framework/Resources//lib -lR -bundle_loader /usr/local/pgsql-9.1/bin/postgres
>>>> GENESISARK:plr dheerajchand$ USE_PGXS=1 make install
>>>> /bin/sh /usr/local/pgsql-9.1/lib/pgxs/src/makefiles/../../config/install-sh -c -d '/usr/local/pgsql-9.1/lib'
>>>> /bin/sh /usr/local/pgsql-9.1/lib/pgxs/src/makefiles/../../config/install-sh -c -d '/usr/local/pgsql-9.1/share/extension'
>>>> /bin/sh /usr/local/pgsql-9.1/lib/pgxs/src/makefiles/../../config/install-sh -c -d '/usr/local/pgsql-9.1/share/doc/extension'
>>>> mkdir: /usr/local/pgsql-9.1/share/doc/extension: Permission denied
>>>> make: *** [installdirs] Error 1
>>>> GENESISARK:plr dheerajchand$ sudo USE_PGXS=1 make install
>>>> Password:
>>>> make: pkg-config: Command not found
>>>> make: pkg-config: Command not found
>>>> make: pkg-config: Command not found
>>>> make: pkg-config: Command not found
>>>> make: pkg-config: Command not found
>>>> make: *** No rule to make target `install'.  Stop.
>>>> GENESISARK:plr dheerajchand$ echo $PATH
>>>> /Users/dheerajchand/pear/bin/:/Applications/ImageMagick-6.7.2/bin:/Users/dheerajchand/Projects/src/pkgthings/bin/pkg-config:/usr/local/pgsql-9.1/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/X11/bin:/usr/local/git/bin:/opt/local/bin:/usr/local/mysql/bin
>>>> 
>>>> ..
> 
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