[OpenDroneMap-users] Error using OpenDroneMap

[Stephen Mather]

Hi Willem,

What do you mean by 58% overlap?

Best,
Steve
On May 17, 2015 2:59 PM, "Willem Buitendyk" <willem at pcfish.ca> wrote:

> Hi Steve,
>
> I agree with your assessment however I’m not sure how to rectify it.  Here
> what I can tell you:
>
> The folder contains all of my images with key.bin and key.gz along with
> all of the subfolders like bundles,matching,pmvs,odm_meshing, etc.  The
> camera is a Canon A2400 IS which I’ve added to the json file using: 6.17
>
> Images are all geotagged using high res GPS taken from pixhawk flight
> controller.  All images display properly using a program like Palantir.
> The overlap is about 58%.  Exposure is adjusted and the images are actually
> quite good.
>
> Here is the output from running the command:
>
>
>   - running pmvs - Sun May 17 11:40:28 PDT 2015
>
>
> --------------------------------------------------
> --- Summary of specified options ---
> # of timages: 2 (enumeration)
> # of oimages: 0 (enumeration)
> level: 1  csize: 2
> threshold: 0.7  wsize: 7
> minImageNum: 3  CPU: 8
> useVisData: 1  sequence: -1
> --------------------------------------------------
> Reading images: **
> 0 Harris running ...1 Harris running ...2663 harris done
> 2713 harris done
> DoG running...DoG running...4255 dog done
> 4255 dog done
> done
> adding seeds
> (0,0)(1,0)done
> ---- Initial: 0 secs ----
> Total pass fail0 fail1 refinepatch: 12070 0 12070 0 0
> Total pass fail0 fail1 refinepatch: 100 0 100 0 0
> Expanding patches...
> ---- EXPANSION: 0 secs ----
> Total pass fail0 fail1 refinepatch: 0 0 0 0 0
> Total pass fail0 fail1 refinepatch: -nan -nan -nan -nan -nan
> FilterOutside
> mainbody:
> Gain (ave/var): 0 0
> 0 -> 0 (-nan%) 0 secs
> Filter Exact: **
> 0 -> 0 (-nan%) 0 secs
> FilterNeighbor: FilterGroups: STATUS: 0 0 0 0 0 0 0 0 0 0
> 0 0 0 0 0 0 0 0 0 0
> 0 0 0 0 0 0 0 0 0 0
> 0 0 0 0 0
> Expanding patches...
> ---- EXPANSION: 0 secs ----
> Total pass fail0 fail1 refinepatch: 0 0 0 0 0
> Total pass fail0 fail1 refinepatch: -nan -nan -nan -nan -nan
> FilterOutside
> mainbody:
> Gain (ave/var): 0 0
> 0 -> 0 (-nan%) 0 secs
> Filter Exact: **
> 0 -> 0 (-nan%) 0 secs
> FilterNeighbor: FilterGroups: STATUS: 0 0 0 0 0 0 0 0 0 0
> 0 0 0 0 0 0 0 0 0 0
> 0 0 0 0 0 0 0 0 0 0
> 0 0 0 0 0
> Expanding patches...
> ---- EXPANSION: 0 secs ----
> Total pass fail0 fail1 refinepatch: 0 0 0 0 0
> Total pass fail0 fail1 refinepatch: -nan -nan -nan -nan -nan
> FilterOutside
> mainbody:
> Gain (ave/var): 0 0
> 0 -> 0 (-nan%) 0 secs
> Filter Exact: **
> 0 -> 0 (-nan%) 0 secs
> FilterNeighbor: FilterGroups: STATUS: 0 0 0 0 0 0 0 0 0 0
> 0 0 0 0 0 0 0 0 0 0
> 0 0 0 0 0 0 0 0 0 0
> 0 0 0 0 0
> ---- Total: 0 secs ----
>
>
>   - running meshing - Sun May 17 11:40:31 PDT 2015
>
>
> [pcl::KdTreeFLANN::setInputCloud] Cannot create a KDTree with an empty
> input cloud!
> [WARNING] Initial residual too low: 0 < 0.000001
> [WARNING] Initial residual too low: 0 < 0.000001
> [WARNING] Initial residual too low: 0 < 0.000001
> [WARNING] Initial residual too low: 0 < 0.000001
> [WARNING] Initial residual too low: 0 < 0.000001
> [pcl::io::savePLYFile] Input point cloud has no data!
> Error in OdmMeshing:
> Error when saving mesh to file:
>
> /home/willem/lake_survey_exp_geo/reconstruction-with-image-size-2400-results/odm_mesh-0000.ply
>
> For more detailed information, see log file.
>
>
> quitting cause:
> "/home/willem/OpenDroneMap/bin/odm_meshing" -inputFile
> /home/willem/lake_survey_exp_geo/reconstruction-with-image-size-2400-results/option-0000.ply
> -outputFile
> /home/willem/lake_survey_exp_geo/reconstruction-with-image-size-2400-results/odm_mesh-0000.ply
> -logFile
> /home/willem/lake_survey_exp_geo/reconstruction-with-image-size-2400/odm_meshing/odm_meshing_log.txt
> -maxVertexCount 100000 -octreeDepth 9 -samplesPerNode 1
> returned with code 256
> willem at pcfish-main:~/lake_survey_exp_geo$
>
> Willem Buitendyk
>
>
>
> On May 14, 2015, at 6:45 PM, Stephen Mather <stephen at smathermather.com>
> wrote:
>
> Hi Willem,
>
> It seems you aren't getting a point cloud from the PMVS step, so when it
> goes to mesh, it has nothing to mesh. What is in your
> reconstruction-with-image-size-2400 folder? Also, what kind of camera are
> the images from?
>
> Thanks,
> Best,
> Steve
>
>
>
>
> On Tue, May 12, 2015 at 3:49 PM, Willem Buitendyk <willem at pcfish.ca>
> wrote:
>
>> I should note that this was originally on ubuntu running on parallels.
>> This time I tried it on a dedicated server running ubuntu 14.04 and
>> received the same error.  There appears to be something wrong with the
>> toolchain.
>>
>> My process was:
>>
>> git clone https://github.com/OpenDroneMap/OpenDroneMap.git
>>
>> install.sh
>>
>> ~/OpenDroneMap/./run.pl from within my folder located at ~/house_survey
>>
>>
>> Willem Buitendyk
>>
>>
>>
>> On May 12, 2015, at 11:05 AM, Willem Buitendyk <willem at pcfish.ca> wrote:
>>
>> Hi there,
>>
>> Ubuntu 14.04.   I’ve installed the latest opendronemap.  When I use the
>> run.pl command everything seems to work up until I receive the following
>> error:
>>
>>  - running meshing - Tue May 12 10:53:27 PDT 2015
>>
>>
>> [pcl::KdTreeFLANN::setInputCloud] Cannot create a KDTree with an empty
>> input cloud!
>> [WARNING] Initial residual too low: 0 < 0.000001
>> [WARNING] Initial residual too low: 0 < 0.000001
>> [WARNING] Initial residual too low: 0 < 0.000001
>> [WARNING] Initial residual too low: 0 < 0.000001
>> [WARNING] Initial residual too low: 0 < 0.000001
>> [pcl::io::savePLYFile] Input point cloud has no data!
>> Error in OdmMeshing:
>> Error when saving mesh to file:
>>
>> /home/willem/house_survey/reconstruction-with-image-size-2400-results/odm_mesh-0000.ply
>>
>> For more detailed information, see log file.
>>
>>
>> quitting cause:
>> "/home/willem/OpenDroneMap/bin/odm_meshing" -inputFile
>> /home/willem/house_survey/reconstruction-with-image-size-2400-results/option-0000.ply
>> -outputFile
>> /home/willem/house_survey/reconstruction-with-image-size-2400-results/odm_mesh-0000.ply
>> -logFile
>> /home/willem/house_survey/reconstruction-with-image-size-2400/odm_meshing/odm_meshing_log.txt
>> -maxVertexCount 100000 -octreeDepth 9 -samplesPerNode 1
>> returned with code 256
>> willem at ubuntu:~/house_survey$
>>
>>
>> Willem Buitendyk
>>
>>
>>
>>
>>
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>> OpenDroneMap-users mailing list
>> OpenDroneMap-users at lists.osgeo.org
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>>
>>
>
>
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