[GRASS-dev] re: python grass problems on OSX (Incompatible library
version for module)
massimo di stefano
massimodisasha at yahoo.it
Sun May 10 15:49:44 EDT 2009
I'm tring to debug these weird situation ....
assured that only osx is affcted by these problems, (on linux i've no
problems)
i tried to run the img2rr executable, using python inside a grass
session (6.4, 6.5 & 7.0)
using a grass raster file it do not works, while using a simple geotif
instead of a grass file ... it works :
GRASS 6.4.0RC3 (spearfish60):~ > export OSSIM_PREFS_FILE=/Users/sasha/
ossim_preferences
GRASS 6.4.0RC3 (spearfish60):~ > ipythonPython 2.5.1 (r251:54863, Jan
13 2009, 10:26:13)
Type "copyright", "credits" or "license" for more information.
IPython 0.9.1 -- An enhanced Interactive Python.
? -> Introduction and overview of IPython's features.
%quickref -> Quick reference.
help -> Python's own help system.
object? -> Details about 'object'. ?object also works, ?? prints more.
In [1]: import os
In [2]: import subprocess
In [3]: subprocess.call('/var/tmp/XcodeBuilds/Release/img2rr /Users/
Shared/grassdata/spearfish60/PERMANENT/cellhd/geology', shell=True)
MPI running with 1 processors...
ERROR: Incompatible library version for module
Out[3]: 1
^^^ Using a grass raster file.
In [5]: subprocess.call('/var/tmp/XcodeBuilds/Release/img2rr /Users/
sasha/Desktop/desk/dsmc.tif', shell=True)
MPI running with 1 processors...
Creating overviews for file: /Users/sasha/Desktop/desk/dsmc.tif
creating r1...
100%
creating r2...
100%
creating r3...
100%
creating r4...
100%
creating r5...
100%
creating r6...
100%
creating r7...
100%
creating r8...
100%
creating r9...
100%
creating r10...
100%
creating r11...
100%
creating r12...
100%
Finished...
Elapsed time: 5
Out[5]: 0
^^^ Using a GTiff file
so ... the problem is in :
export OSSIM_PREFS_FILE=/Users/sasha/ossim_preferences
inside grass - python it do not works as aspected.
here other debug :
start a new grass shell, omitting the step :
export OSSIM_PREFS_FILE=/Users/sasha/ossim_preferences
GRASS 6.4.0RC3 (spearfish60):~ > ipython
..
...
In [1]: import os
In [2]: import subprocess
In [3]: subprocess.call('/var/tmp/XcodeBuilds/Release/img2rr /Users/
Shared/grassdata/spearfish60/PERMANENT/cellhd/geology', shell=True)
MPI running with 1 processors...
WARNING: Unable to open image file /Users/Shared/grassdata/spearfish60/
PERMANENT/cellhd/geology
Elapsed time: 0
Out[3]: 0
^^^ the same message come up in bash too, if i don't export the
"OSSIM_PREFS_FILE=/Users/sasha/ossim_preferences"
adding the export line :
In [4]: os.environ['OSSIM_PREFS_FILE'] = '/Users/sasha/
ossim_preferences'
In [5]: subprocess.call('/var/tmp/XcodeBuilds/Release/img2rr /Users/
Shared/grassdata/spearfish60/PERMANENT/cellhd/geology', shell=True)
MPI running with 1 processors...
ERROR: Incompatible library version for module
Out[5]: 1
it give me the lib error
but ... the libs are not broken!
beacouse inside a standard python it works :
In [1]: import os
In [2]: import subprocess
In [3]: os.environ['OSSIM_PREFS_FILE'] = '/Users/sasha/
ossim_preferences'
In [4]: subprocess.call('/var/tmp/XcodeBuilds/Release/img2rr /Users/
Shared/grassdata/spearfish60/PERMANENT/cellhd/geology', shell=True)
MPI running with 1 processors...
Creating overviews for file: /Users/Shared/grassdata/spearfish60/
PERMANENT/cellhd/geology
creating r1...
100%
creating r2...
100%
creating r3...
100%
creating r4...
100%
creating r5...
100%
creating r6...
100%
Finished...
Elapsed time: 0
Out[4]: 0
doing a more depth debug ....
i tried to wrote a script in grass, to avoid use of python, that is :
####################################
#!/bin/sh
#% Module
#% description: Calculates Optimum-Index-Factor table for LANDSAT TM
bands 1-5, & 7
#% keywords: raster, imagery, statistics
#% End
#% option
#% key: image1
#% type: string
#% gisprompt: old,cell,raster
#% description: LANDSAT TM band 1.
#% required : yes
#% end
if [ -z "$GISBASE" ]
then
echo "You must be in GRASS GIS to run this program" >&2
exit 1
fi
if [ "$1" != "@ARGS_PARSED@" ]
then
exec g.parser "$0" "$@"
fi
eval `g.gisenv`
: ${GISBASE?} ${GISDBASE?} ${LOCATION_NAME?} ${MAPSET?}
LOCATION=$GISDBASE/$LOCATION_NAME/$MAPSET
export OSSIM_PREFS_FILE=/Users/sasha/ossim_preferences
/var/tmp/XcodeBuilds/Release/img2rr $LOCATION/cellhd/$GIS_OPT_IMAGE1
####################################
unlucky i get the same error :
GRASS 6.4.0RC3 (spearfish60):~ > i.img2rr image1=geology
MPI running with 1 processors...
ERROR: Incompatible library version for module
... at least i eliminate the python ... as the cause of my problrems :-(
please people help mde to know what is the problem, if exists a wok-
around ... or do you know a solution ...
but ... maybe a know the answer, is these problem generated by a
difference in the libs that i'm using to build ossim and grass ???
for the build i'm using the exactly same gdal.framework ... but my
think is about tiff/libgeotiff files ... maybe they can be the cause?
any suggestion is really welcome!
Have you any ideas about these weird behavioure, why it happens, how
to debug it ?
please tell me if you need better description, or log.
Thanks!!!
Massimo Di Stefano
massimodisasha a yahoo.it
epifanio on irc.freenode.net /join gfoss
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