[OpenDroneMap-users] problem running ODM - parallel --halt-on-error 1 -j+0

Ivan Lizarazo ivan.lizarazo at gmail.com
Mon Mar 2 17:19:09 PST 2015


Many thanks, Steve. I'll resume my ODM tests very soon.

Best regards,

Ivan

El domingo, 1 de marzo de 2015, Stephen Mather <stephen at smathermather.com>
escribió:

> Hi Ivan,
>
> I finally added docs for this today. I am currently testing, so hopefully
> I have documented correctly!
>
> https://github.com/OpenDroneMap/OpenDroneMap/wiki/Running-OpenDroneMap
>
> Also see:
> https://smathermather.wordpress.com/2015/03/01/opendronemap-gcp-file-format/
>
> Best,
> Steve
>
>
>
>
> On Thu, Feb 26, 2015 at 2:08 PM, Ivan Lizarazo <ivan.lizarazo at gmail.com
> <javascript:_e(%7B%7D,'cvml','ivan.lizarazo at gmail.com');>> wrote:
>
>> Dear Anna
>>
>> Thank you for your suggestion.  I renamed all my images to *.jpg and
>> could complete the texturing step.
>>
>> However, ODM could not execute the subsequent georeferencing step.  The
>> odm_georeferencing_log reads as follows:
>>
>>
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>> *Arguments
>> given-bundleFile/home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400/pmvs/bundle.rd.out-gcpFile/home/ivan/odm_data/benchmark/gcp_list.txt-imagesPath/home/ivan/odm_data/benchmark/-imagesListPath/home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400/pmvs/list.rd.txt-bundleResizedTo2400-inputFile/home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400-results/odm_texturing/odm_textured_model.obj-outputFile/home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400-results/odm_texturing/odm_textured_model_geo.obj-logFile/home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400/odm_georeferencing/odm_georeferencing_log.txtReading
>> cameras from:
>> /home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400/pmvs/bundle.rd.outReading
>> GCPs from: /home/ivan/odm_data/benchmark/gcp_list.txtImages location is set
>> to: /home/ivan/odm_data/benchmark/Reading image list from:
>> /home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400/pmvs/list.rd.txtBundle
>> resize value is set to: 2400Reading textured mesh from:
>> /home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400-results/odm_texturing/odm_textured_model.objWriting
>> output to:
>> /home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400-results/odm_texturing/odm_textured_model_geo.objLog
>> file path was set to:
>> /home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400/odm_georeferencing/odm_georeferencing_log.txtError
>> in Georef:Failed opening /home/ivan/odm_data/benchmark/gcp_list.txt for
>> reading.*
>>
>>
>> It seems ODM needs a gcp_list.txt file to continue.  I understand that
>> georeferencing is the last step in the processing chain and that nothing
>> else remains to be done by ODM. Am I right?
>>
>> Could anybody provide a gcp_list.txt for any of the odm_data examples?
>> Just to try to complete the data processing.
>>
>> Best regards,
>>
>>
>> Ivan
>>
>>
>>
>> On Thu, Feb 26, 2015 at 6:39 AM, Anna Petrášová <kratochanna at gmail.com
>> <javascript:_e(%7B%7D,'cvml','kratochanna at gmail.com');>> wrote:
>>
>>> Hi Ivan,
>>>
>>> On Thu, Feb 26, 2015 at 4:26 AM, Ivan Lizarazo <ivan.lizarazo at gmail.com
>>> <javascript:_e(%7B%7D,'cvml','ivan.lizarazo at gmail.com');>> wrote:
>>>
>>>> Dear Blake,
>>>>
>>>> As you noticed, my ODM installation was incomplete. I ran the install
>>>> script again and it ended with script finished.
>>>>
>>>> I tried running ODM again.  After a while I received this message:
>>>>
>>>
>>> I ran into this, too. You probably have images with upper case extension
>>> JPG It's a known issue
>>> https://github.com/OpenDroneMap/OpenDroneMap/issues/33
>>>
>>> but it's easy to get around, just rename all your files to *.jpg.
>>>
>>> Anna
>>>
>>>>
>>>> ---
>>>> Expanding patches...
>>>> ---- EXPANSION: 14 secs ----
>>>> Total pass fail0 fail1 refinepatch: 8980 3660 1798 3522 7182
>>>> Total pass fail0 fail1 refinepatch: 100 40.7572 20.0223 39.2205 79.9777
>>>> FilterOutside
>>>> mainbody:
>>>> Gain (ave/var): 1.62477 0.76022
>>>> 12422 -> 12410 (99.9034%)    0 secs
>>>> Filter Exact: **********
>>>> 12410 -> 12059 (97.1716%)    0 secs
>>>> FilterNeighbor:    12059 -> 11582 (96.0444%)    0 secs
>>>> FilterGroups:    20
>>>> 11582 -> 11363 (98.1091%)    0 secs
>>>> STATUS: 20773 0 19107 0 0 0 0 0 0 0
>>>> 0 0 0 0 0 0 0 0 0 0
>>>> 0 0 0 0 0 0 0 0 0 0
>>>> 0 0 0 0 0
>>>> ---- Total: 0 secs ----
>>>>
>>>>   - running meshing -
>>>>
>>>>   - running texturing -
>>>> Error in OdmTexturing:
>>>> Error in OdmTexturing:
>>>> Failed to read image:
>>>> '/home/ivan/odm_data/benchmark//DSC05516.jpg'
>>>>
>>>> For more detailed information, see log file.
>>>>
>>>>
>>>> quitting cause:
>>>>     "/home/ivan/OpenDroneMap/bin/odm_texturing" -bundleFile
>>>> /home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400/pmvs/bundle.rd.out
>>>> -imagesPath /home/ivan/odm_data/benchmark/ -imagesListPath
>>>> /home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400/pmvs/list.rd.txt
>>>> -inputModelPath
>>>> /home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400-results/odm_mesh-0000.ply
>>>> -outputFolder
>>>> /home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400-results/odm_texturing/
>>>> -textureResolution 4096 -bundleResizedTo 2400 -textureWithSize 3600
>>>> -logFile
>>>> /home/ivan/odm_data/benchmark/reconstruction-with-image-size-2400/odm_texturing/odm_texturing_log.txt
>>>> returned with code 256
>>>>
>>>> Any suggestion for solving this?
>>>>
>>>> Best regards,
>>>>
>>>>
>>>> Ivan
>>>>
>>>> On Wed, Feb 25, 2015 at 7:46 PM, Blake Girardot <bgirardot at gmail.com
>>>> <javascript:_e(%7B%7D,'cvml','bgirardot at gmail.com');>> wrote:
>>>>
>>>>> Hi Ivan,
>>>>>
>>>>> Are you sure ODM installed correctly?
>>>>>
>>>>> Did you see the " - script finished " message at the end of the
>>>>> install script?
>>>>>
>>>>> You can just run the install script again, make sure it ends with
>>>>> script finished.
>>>>>
>>>>> Cheers,
>>>>> Blake
>>>>>
>>>>>
>>>>>
>>>>> On 2/26/2015 1:29 AM, Ivan Lizarazo wrote:
>>>>>
>>>>>> Hi everybody,
>>>>>>
>>>>>> Many thanks to OpenDroneMap developers for such a great work.
>>>>>> I've just installed ODM and  started to using it.
>>>>>>
>>>>>> However, I've got a problem when running|./run.pl  <http://run.pl>|
>>>>>> from the benchmark example data directory. I've got the following error:
>>>>>>
>>>>>> /...
>>>>>> using existing DSC05531.JPG     to /home/ivan/OpenDroneMap/odm_
>>>>>> data/benchmark/reconstruction-with-image-size-2400/DSC05531.jpg
>>>>>>  (2400 x 1800)
>>>>>>
>>>>>>    - finding keypoints - mié feb 25 08:42:07 COT 2015
>>>>>>
>>>>>>
>>>>>> sh: 1: /home/ivan/OpenDroneMap/bin/parallel: not found
>>>>>>
>>>>>>
>>>>>> quitting cause:
>>>>>>         "/home/ivan/OpenDroneMap/bin/parallel" --halt-on-error 1
>>>>>> -j+0 < "/home/ivan/OpenDroneMap/odm_data/benchmark/reconstruction-
>>>>>> with-image-size-2400/_vlsift.templist.txt"
>>>>>> returned with code 32512/
>>>>>>
>>>>>> My OS is Debian Wheezy running on an ASUS N56J laptop.
>>>>>>
>>>>>>
>>>>>> Any suggestion for solving this issue will be appreciated.
>>>>>>
>>>>>> Best regards
>>>>>>
>>>>>>
>>>>>> ---
>>>>>>
>>>>>> Ivan Lizarazo
>>>>>>
>>>>>>
>>>>>>
>>>>>>
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>>>>>>
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