[Qgis-user] rpy2.robjects

Giovanni Manghi giovanni.manghi at gmail.com
Tue Nov 10 17:48:13 PST 2009


Hi,

I don't know a thing about Mac, but maybe it can be still useful.

Under linux, when the python library you need is not packaged (as for
example rpy2 for ubuntu < 9.10) you can use a nice tool called "easy
install" that come with the python package "setup tools"

http://pypi.python.org/pypi/setuptools

once installed you can add python libraries with a simple command, like

sudo easy_install rpy2

(obviously referred to ubuntu linux).


cheers

-- Giovanni --


On Tue, 2009-11-10 at 23:36 -0200, gustavocanale at pop.com.br wrote:
> Hi everybody, 
> I am a newcomer to R, Qgis and Mac, so I have a long way to go to
> understand Python, Xcode, Terminal, etc..
> I tried to install SDA4PP 0.125 (Spatial Data Analysis for Point
> Pattern with R) to run Home Range Analysis (specifically Kernel
> analysis) but it failed because rpy2.robjects was missing. I tried to
> install it and couldn't find it. 
> When I try to run Home Range Analysis (Kernell adusted h) I received
> the following message in Python console:
> 
> An error has occured while executing Python code:

Traceback (most
> recent call last):
  File
> "/Users/gustavocanale/.qgis//python/plugins/HomeRange_plugin/HRplugin_dialog.py", line 76, in 
    QObject.connect(self.buttonBox, SIGNAL("accepted()"), lambda mth=mth: self.run(mth))
  File "/Users/gustavocanale/.qgis//python/plugins/HomeRange_plugin/HRplugin_dialog.py", line 178, in run
    if not robjects.r.require(i)[0]:
NameError: global name 'robjects' is not defined

Python version:
2.5.1 (r251:54863, Jun 17 2009, 20:37:34) 
[GCC 4.0.1 (Apple Inc. build 5465)]

Python path:['/Applications/Qgis.app/Contents/MacOS/../Resources/python', '/Users/gustavocanale/.qgis//python/plugins', '/Applications/Qgis.app/Contents/MacOS/../Resources/python/plugins', '/Library/Frameworks/SQLite3.framework/Versions/3/Python', '/Library/Frameworks/GEOS.framework/Versions/3/Python/2.5/site-packages/geos', '/Library/Frameworks/GDAL.framework/Versions/1.6/Python/site-packages', '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python25.zip', '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5', '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/plat-darwin', '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/plat-mac', '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/plat-mac/lib-scriptpackages', '/System/Library/Frameworks/Python.framework/Versions/2.5/Extras/lib/python', '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/lib-tk', '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/lib-dynload', '/Library/Python/2.5/site-packages', '/System/Library/Frameworks/Python.framework/Versions/2.5/Extras/lib/python/PyObjC', '/Applications/Qgis.app/Contents/Resources/python/plugins/fTools/tools', '/Users/gustavocanale/.qgis/python/plugins/GdalTools/tools', '/usr/share/qgis/python']
> 
> Could you let me know what to do?
> I guess I should install Rpy2 but I couldn't find a working link, and
> also I don't know if I just have to install it in Utilities in Mac.
> Many tks
> Gustavo
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