[GRASS-user] v vol rst super slow

Francois Chartier fra.chartier at gmail.com
Wed May 23 19:05:59 PDT 2018


Thank you,

v.vol.rst input=BHMat1All_May12 at Toronto wcolumn=cat dmin=5
elevation=may23trial

it would appear to have worked.  I changed the resolution to 200 m
horizontally and 5 m for z using g.region as  a trial.
now the big question is how do you see the data.  I am able to view a 2D
raster by changing the color scale but 3d raster is blank,


----------------------------------------------------------------------------+
 | Layer:    may23trial at Toronto             Date: Wed May 23 21:46:30 2018
  |
 | Mapset:   Toronto                        Login of Creator: Francois
Charti |
 | Location: Toronto
  |
 | DataBase: C:\Users\Francois Chartier\Documents\grassdata
   |
 | Title:    may23trial
   |
 | Units:    none
   |
 | Vertical unit: units
   |
 | Timestamp: none
  |
 |----------------------------------------------------------------------------|
 |
  |
 |   Type of Map:  raster_3d            Number of Categories: 0
   |
 |   Data Type:    FCELL
  |
 |   Rows:         90
   |
 |   Columns:      85
   |
 |   Depths:       61
   |
 |   Total Cells:  466650
   |
 |   Total size:           853368 Bytes
   |
 |   Number of tiles:      64
   |
 |   Mean tile size:       13333 Bytes
  |
 |   Tile size in memory:  32384 Bytes
  |
 |   Number of tiles in x, y and  z:   4, 4, 4
  |
 |   Dimension of a tile in x, y, z:   22, 23, 16
   |
 |
  |
 |        Projection: UTM (zone 17)
   |
 |            N:    4870795    S:    4825715   Res: 500.88888889
  |
 |            E:     651669    W:     609204   Res: 499.58823529
  |
 |            T:        352    B:         45   Res: 5.03278689
  |
 |   Range of data:   min = -0.18226054 max = 32.72385025
   |
 |
  |
 |   Data Source:
   |
 |
  |
 |
  |
 |
  |
 |   Data Description:
  |
 |    generated by v.vol.rst
  |
 |
  |
 |   Comments:
  |
 |    v.vol.rst input="BHMat1All_May12 at Toronto" wcolumn="cat" tension=40.
\   |
 |    smooth=0.1 segmax=50 npmin=200 npmax=700 dmin=5 wscale=1.0
zscale=1.\   |
 |    0 elevation="may23trial"
  |
 |
  |
 +----------------------------------------------------------------------------+
(Wed May 23 21:54:13 2018) Command finished (0 sec)



2018-05-23 21:42 GMT-04:00 Anna Petrášová <kratochanna at gmail.com>:

> On Wed, May 23, 2018 at 9:02 PM, Francois Chartier
> <fra.chartier at gmail.com> wrote:
> > How do you change the resolution to something coarser?
>
> With g.region, res= is horizontal and tbres= is vertical resolution, e.g:
>
> g.region res=200 tbres=200 -p3
>
> >
> > 2018-05-23 15:30 GMT-04:00 Markus Metz <markus.metz.giswork at gmail.com>:
> >>
> >>
> >>
> >> On Wed, May 23, 2018 at 1:09 PM, Francois Chartier
> >> <fra.chartier at gmail.com> wrote:
> >> >
> >> > see below
> >> > g.region -3p
> >> >
> >> > projection: 1 (UTM)
> >> > zone:       17
> >> > datum:      nad83
> >> > ellipsoid:  grs80
> >> > north:      4870795
> >> > south:      4825715
> >> > west:       609204
> >> > east:       651669
> >> > top:        352.00000000
> >> > bottom:     45.00000000
> >> > nsres:      5
> >> > nsres3:     5
> >> > ewres:      5
> >> > ewres3:     5
> >> > tbres:      1
> >> > rows:       9016
> >> > rows3:      9016
> >> > cols:       8493
> >> > cols3:      8493
> >> > depths:     307
> >> > cells:      76572888
> >> > cells3:     23507876616
> >> >
> >> > for v.vol.rst command line - i am not sure where you get this so i
> just
> >> > restarted the simulation.
> >> > Wed May 23 07:07:59 2018)
> >> > v.vol.rst input=BHMat1All_May12 at Toronto wcolumn=cat dmin=0.1
> >> > 25 records selected from table
> >> > Processing all selected output files will require 0 bytes of disk
> space
> >> > for temp files
> >> > WARNING: Points are more dense than specified 'DMIN'--ignored 65
> points
> >> > (remain 76822)
> >> > WARNING: Unable to create <(null)> raster map without cross_input
> raster
> >> > map being specified
> >> >
> >> >
> >> >
> >> > v.info
> >> > (Wed May 23 07:06:24 2018)
> >> > v.info map=BHMat1All_May12 at Toronto
> >> >
> >> > +-----------------------------------------------------------
> -----------------+
> >> >  | Name:            BHMat1All_May12
> >> > |
> >> >  | Mapset:          Toronto
> >> > |
> >> >  | Location:        Toronto
> >> > |
> >> >  | Database:        C:\Users\Francois Chartier\Documents\grassdata
> >> > |
> >> >  | Title:
> >> > |
> >> >  | Map scale:       1:1
> >> > |
> >> >  | Name of creator: Francois Chartier
> >> > |
> >> >  | Organization:
> >> > |
> >> >  | Source date:     Sat May 12 15:45:44 2018
> >> > |
> >> >  | Timestamp (first layer): none
> >> > |
> >> >
> >> > |-----------------------------------------------------------
> -----------------|
> >> >  | Map format:      native
> >> > |
> >> >
> >> > |-----------------------------------------------------------
> -----------------|
> >> >  |   Type of map: vector (level: 2)
> >> > |
> >> >  |
> >> > |
> >> >  |   Number of points:       76887           Number of centroids:  0
> >> > |
> >> >  |   Number of lines:        0               Number of boundaries: 0
> >> > |
> >> >  |   Number of areas:        0               Number of islands:    0
> >> > |
> >> >  |   Number of faces:        0               Number of kernels:    0
> >> > |
> >> >  |   Number of volumes:      0               Number of holes:      0
> >> > |
> >> >  |
> >> > |
> >> >  |   Map is 3D:              Yes
> >> > |
> >> >  |   Number of dblinks:      1
> >> > |
> >> >  |
> >> > |
> >> >  |   Projection: UTM (zone 17)
> >> > |
> >> >  |
> >> > |
> >> >  |               N:           4870795    S:           4825715
> >> > |
> >> >  |               E:            651669    W:            609204
> >> > |
> >> >  |               B:                45    T:               352
> >> > |
> >> >  |
> >> > |
> >> >  |   Digitization threshold: 0
> >> > |
> >> >  |   Comment:
> >> > |
> >> >  |
> >> > |
> >> >
> >> > +-----------------------------------------------------------
> -----------------+
> >> > (Wed May 23 07:06:24 2018) Command finished (0 sec)
> >>
> >> The current target resolutions of
> >>
> >> nsres3:     5
> >> ewres3:     5
> >> tbres:      1
> >>
> >> are much too high for the given extents and the coverage of the input
> >> points
> >>
> >> According to the output of v.info, a point covers on average about
> 7643645
> >> cubic meters which corresponds to voxels with edge length of about 200
> >> meters. Therefore a good starting point would be a 3D region with
> >> resolutions in all 3 dimensions of 200 meter. If the results make
> sense, the
> >> resolutions can be slowly increased.
> >>
> >> Markus M
> >> >
> >> >
> >> > 2018-05-23 6:07 GMT-04:00 Moritz Lennert <
> mlennert at club.worldonline.be>:
> >> >>
> >> >> Hi François,
> >> >>
> >> >> Please keep all discussions on the list.
> >> >>
> >> >> On 23/05/18 02:26, Francois Chartier wrote:
> >> >>>
> >> >>> Hi Moritz,
> >> >>>
> >> >>> see below.  seems like i have 6M cells
> >> >>>
> >> >>> projection: 1 (UTM)
> >> >>> zone:       17
> >> >>> datum:      nad83
> >> >>> ellipsoid:  grs80
> >> >>> north:      4868980
> >> >>> south:      4829680
> >> >>> west:       609620
> >> >>> east:       651628
> >> >>> nsres:      5
> >> >>> ewres:      4.99976196
> >> >>> rows:       7860
> >> >>> cols:       8402
> >> >>> cells:      66039720
> >> >>
> >> >>
> >> >>
> >> >> Sorry, my fault: as you are interpolating in 3D we need the 3D
> region,
> >> >> so the output of 'g.region -3p'.
> >> >>
> >> >> And could you also provide us with:
> >> >>
> >> >> - the exact v.vol.rst command line you used
> >> >> - the output of v.info on your point dataset
> >> >>
> >> >> ?
> >> >>
> >> >> Moritz
> >> >>
> >> >>>
> >> >>> 2018-05-22 7:58 GMT-04:00 Moritz Lennert <
> mlennert at club.worldonline.be
> >> >>> <mailto:mlennert at club.worldonline.be>>:
> >> >>>
> >> >>>
> >> >>>
> >> >>>     Am 22. Mai 2018 04:35:13 MESZ schrieb Francois Chartier
> >> >>>     <fra.chartier at gmail.com <mailto:fra.chartier at gmail.com>>:
> >> >>>      >Hi,
> >> >>>      >
> >> >>>      >I am interpolating 2D data using V Vol RST.  After 90 min the
> >> >>> process
> >> >>>      >progressed 15%, and I stopped it.
> >> >>>      >There are approx 370 points, and it should not take this long.
> >> >>> I am
> >> >>>      >not
> >> >>>      >sure what I am doing incorrectly.  I have set the g.region to
> >> >>>     match the
> >> >>>      >vector, and joined the vector attribute to the database.
> >> >>>
> >> >>>     What is the resolution of the region ?
> >> >>>
> >> >>>     Please provide the output of g.region -p.
> >> >>>
> >> >>>     Moritz
> >> >>>
> >> >>>
> >> >>
> >> >>
> >> >
> >> >
> >> > _______________________________________________
> >> > grass-user mailing list
> >> > grass-user at lists.osgeo.org
> >> > https://lists.osgeo.org/mailman/listinfo/grass-user
> >
> >
> >
> > _______________________________________________
> > grass-user mailing list
> > grass-user at lists.osgeo.org
> > https://lists.osgeo.org/mailman/listinfo/grass-user
>
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(Wed May 23 21:46:14 2018)                                                      
v.vol.rst input=BHMat1All_May12 at Toronto wcolumn=cat dmin=0.5 elevation=may23trial
25 records selected from table
ERROR: Points are too concentrated -- please increase DMIN
(Wed May 23 21:46:15 2018) Command finished (0 sec)                             
(Wed May 23 21:46:29 2018)                                                      
v.vol.rst input=BHMat1All_May12 at Toronto wcolumn=cat dmin=5 elevation=may23trial 
25 records selected from table
WARNING: Some points outside of region -- will ignore...
Processing all selected output files will require 30600 bytes of disk space for temp files
WARNING: There are points outside specified 2D/3D region--ignored 19 points (total points: 76887)
WARNING: Points are more dense than specified 'DMIN'--ignored 60377 points (remain 16510)
WARNING: Unable to create <(null)> raster map without cross_input raster map being specified
Finished interpolating
3D raster map <may23trial> created
The number of points in vector map is 76887
The number of points outside of 2D/3D region 19
The number of points used (after reduction) is 16491
(Wed May 23 21:47:38 2018) Command finished (1 min 8 sec)                       


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