[Qgis-user] Re: Qgis-user Digest, Vol 27, Issue 13

Carson Farmer cfarmer at uvic.ca
Tue May 13 10:26:38 PDT 2008


Agustin Lobo wrote:
> ok, just installed Rpy 1.0.3
> (BTW, should I have uninstalled 1.02? how?)
> and manageR loads
> on qgis 0.10 on ubuntu hardy.
> Carson, could you provide some directions on how to use it
> or point me to any file with some directions?
The plugin dialog can be treated like the R console itself. So whatever 
commands you would type into R, you can do in manageR (just make sure 
you use '<-' when assigning variables etc. as manageR doesn't like you 
to use '='). I have an updated manageR version which, in addition to 
making it easier to load spatial data, also makes it very easy to save R 
spatial objects as shapefiles and automatically load them into QGIS. 
This will be up on my repository soon (I will post a notice to this list 
when it is).

As for directions on how to use manageR, I have not really come up with 
anything yet, but I will try to post something soon with a basic how to 
and some screen shots or something.

Hope this is enough to get you started!

Carson
> Should I have R started or should I start it from within
> your plugin?
>
> Thanks!
>
> Agus
>
> Agustin Lobo wrote:
>> Hi!
>>
>> Rpy 1.0.3 is available since today!
>> "The primary purpose of
>> this release is to provide support for R 2.7.0."
>> But no windows yet (not a problem in my case).
>> More on:
>> http://sourceforge.net/mailarchive/forum.php?thread_name=7C8225C0-9810-401A-857F-1B3D6EE4E5F4%40rochester.edu&forum_name=rpy-lis 
>>
>>
>> I'll let you know how it goes with it.
>>
>> Agus
>>
>> Carson Farmer wrote:
>>> Agus,
>>> Unfortunately, the latest R and  Rpy versions are not compatible on 
>>> Hardy, so the main repositories will be no help to you in this 
>>> regard.  However, there are two solutions (that I know of):
>>> 1) If you are able to, you can regress to an earlier version of R, 
>>> such as 2.6.0 or 2.6.2. Rpy works fine for older versions.
>>> 2) If you don't mind a little bit of extra work, you can follow the 
>>> fix posted by Diwaker Gupta (this is actually for Gutsy, but it 
>>> still works...) and a few posts afterwards to get Rpy working with 
>>> the latest R.
>>>
>>> Personally, I use R 2.6.0 and Rpy 1.0.1 (though I think 1.0.2 is the 
>>> most recent)
>>>
>>> Hope this helps,
>>>
>>> Carson
>>> a.k.a. cfarmer on IRC
>>>> No idea, I installed rpy for using manageR. How can I test it? Agus 
>>>> Sebastien Vial wrote:
>>>>> > Hi !
>>>>> > > Here it works but with R 2.6.1 (and the RPY build for R 2.6.1)
>>>>> > > Does your RPY works with R 2.7 ?
>>>>> > > Seb
>>>>> > > 2008/5/12 Agustin Lobo <aloboaleu at gmail.com>:
>>>>> >  
>>>>>> >> Hi!
>>>>>> >>
>>>>>> >> I have a problem with loading plugin manageR.
>>>>>> >> I have R 2.7.0, rpy 1.0.2 , python and numpy on ubuntu hardy.
>>>>>> >> I get
>>>>>> >> the following message at starting qgis 0.10:
>>>>>> >>
>>>>>> >> Couldn't load plugin "manageR" from 
>>>>>> ['/home/alobo/.qgis//python/plugins',
>>>>>> >> '/usr/local/share/qgis/python', 
>>>>>> '/usr/local/share/qgis/python/plugins',
>>>>>> >> '/usr/lib/python25.zip', '/usr/lib/python2.5',
>>>>>> >> '/usr/lib/python2.5/plat-linux2', '/usr/lib/python2.5/lib-tk',
>>>>>> >> '/usr/lib/python2.5/lib-dynload', 
>>>>>> '/usr/local/lib/python2.5/site-packages',
>>>>>> >> '/usr/lib/python2.5/site-packages',
>>>>>> >> '/usr/lib/python2.5/site-packages/Numeric',
>>>>>> >> '/usr/lib/python2.5/site-packages/PIL',
>>>>>> >> '/usr/lib/python2.5/site-packages/gst-0.10',
>>>>>> >> '/var/lib/python-support/python2.5',
>>>>>> >> '/usr/lib/python2.5/site-packages/gtk-2.0',
>>>>>> >> '/var/lib/python-support/python2.5/gtk-2.0']
>>>>>> >>
>>>>>> >> Traceback (most recent call last):
>>>>>> >>  File "", line 2, in
>>>>>> >>  File "/home/alobo/.qgis//python/plugins/manageR/__init__.py", 
>>>>>> line 35, in
>>>>>> >>  from manageR import manageRPlugin
>>>>>> >>  File "/home/alobo/.qgis//python/plugins/manageR/manageR.py", 
>>>>>> line 40, in
>>>>>> >>  import domanageR
>>>>>> >>  File 
>>>>>> "/home/alobo/.qgis//python/plugins/manageR/domanageR.py", line 
>>>>>> 39, in
>>>>>> >>  from rpy import *
>>>>>> >>  File "/usr/lib/python2.5/site-packages/rpy.py", line 134, in
>>>>>> >>  """ % RVERSION)
>>>>>> >> RuntimeError: /usr/lib/python2.5/site-packages/_rpy2070.so: 
>>>>>> undefined
>>>>>> >> symbol: KillAllDevices
>>>>>> >>
>>>>>> >>   RPy module can not be imported. Please check if your rpy
>>>>>> >>   installation supports R 2.7.0. If you have multiple R versions
>>>>>> >>   installed, you may need to set RHOME before importing rpy. For
>>>>>> >>   example:
>>>>>> >>
>>>>>> >>   >>> from rpy_options import set_options
>>>>>> >>   >>> set_options(RHOME='c:/progra~1/r/rw2011/')
>>>>>> >>   >>> from rpy import *
>>>>>> >>
>>>>>> >> Is there anything I had to do and did not? Is there anything 
>>>>>> to set up
>>>>>> >> within R?
>>>>>> >>
>>>>>> >> Thanks!
>>>>>> >>
>>>>>> >> Agus
>>>>>> >>
>>>>>> >> --
>>>>>> >> Dr. Agustin Lobo
>>>>>> >> Institut de Ciencies de la Terra "Jaume Almera" (CSIC)
>>>>>> >> LLuis Sole Sabaris s/n
>>>>>> >> 08028 Barcelona
>>>>>> >> Spain
>>>>>> >> Tel. 34 934095410
>>>>>> >> Fax. 34 934110012
>>>>>> >> email: Agustin.Lobo at ija.csic.es
>>>>>> >> http://www.ija.csic.es/gt/obster
>>>>>> >> _______________________________________________
>>>>>> >> Qgis-user mailing list
>>>>>> >> Qgis-user at lists.osgeo.org
>>>>>> >> http://lists.osgeo.org/mailman/listinfo/qgis-user
>>>>>> >>
>>>>>>       
>>>>> > > >     
>>>>
>>>> -- Dr. Agustin Lobo Institut de Ciencies de la Terra "Jaume Almera" 
>>>> (CSIC) LLuis Sole Sabaris s/n 08028 Barcelona Spain Tel. 34 
>>>> 934095410 Fax. 34 934110012 email: Agustin.Lobo at ija.csic.es 
>>>> http://www.ija.csic.es/gt/obster
>>>
>>
>



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